Type ID Taxonomy Variety_name Assembly Source Instrument Layout Related_literature BUSCO contig(Mb) East Asian species EA_SRR5891685 Vitis adenoclada NA Megahit NCBI (PRJNA393611: SRR5891685) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.376 382.1015978 East Asian species EA_SRR5892017 Vitis adenoclada NA Megahit NCBI (PRJNA393611: SRR5892017) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.581 433.247139 East Asian species EA_SRR11078308 Vitis amurensis IBAS1988 Megahit NCBI (PRJNA606045: SRR11078308) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.706 483.1976538 East Asian species EA_SRR7662544 Vitis amurensis NA Megahit NCBI (PRJNA485199: SRR7662544) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.711 485.1326656 East Asian species EA_SRR769832 Vitis amurensis Amurensis From Northeast of China Megahit NCBI (PRJNA192798: SRR769832) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.048 106.1723089 North American species NA_GCA_001282645.1 Vitis riparia × Vitis cinerea Börner GCA_001282645.1_BoeWGS1.0_2015 NCBI (PRJEB5934) The assembled contigs was directly cited. NA Ochssner I, Hausmann L, Töpfer R. Rpv14, a new genetic source for Plasmopara viticola resistance conferred by Vitis cinerea[J]. Vitis, 2016, 55(2): 79-81. 0.417 513.3915405 East Asian species EA_SRR5483432 Vitis amurensis Zuoshaner Megahit NCBI (PRJNA384014: SRR5483432) Illumina HiSeq 2000 PAIRED Yin L, Qu J, Deng S, et al. Phytohormone and genome variations in Vitis amurensis resistant to downy mildew[J]. Genome, 2017, 60(10): 791-796. 0.601 307.7784176 East Asian species EA_SRR5892016 Vitis amurensis Amur Grape\, Mountain Grape Megahit NCBI (PRJNA393611: SRR5892016) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.554 425.6243124 East Asian species EA_SRR5892018 Vitis amurensis Amur Grape\, Mountain Grape Megahit NCBI (PRJNA393611: SRR5892018) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.49 416.5061779 East Asian species EA_SRR5892019 Vitis amurensis Amur Grape\, Mountain Grape Megahit NCBI (PRJNA393611: SRR5892019) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.149 298.0539579 East Asian species EA_SRR5892021 Vitis amurensis Amur Grape\, Mountain Grape Megahit NCBI (PRJNA393611: SRR5892021) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.417 417.3804369 East Asian species EA_SRR769842 Vitis amurensis Dissecta Megahit NCBI (PRJNA192798: SRR769842) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.041 92.54401588 East Asian species EA_SRR769844 Vitis amurensis Amurensis From Russia Megahit NCBI (PRJNA192798: SRR769844) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.046 91.26272583 East Asian species EA_SRR5891950 Vitis amurensis Rupr. var. yanshanensis NA Megahit NCBI (PRJNA393611: SRR5891950) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.327 374.0995932 East Asian species EA_SRR5891951 Vitis amurensis Rupr. var. yanshanensis NA Megahit NCBI (PRJNA393611: SRR5891951) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.521 447.4646921 East Asian species EA_SRR5891949 Vitis balanseana NA Megahit NCBI (PRJNA393611: SRR5891949) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.702 432.2340326 East Asian species EA_SRR5892020 Vitis bashanica NA Megahit NCBI (PRJNA393611: SRR5892020) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.372 397.7360144 East Asian species EA_SRR5892023 Vitis bellula NA Megahit NCBI (PRJNA393611: SRR5892023) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.682 448.3937149 East Asian species EA_SRR5892022 Vitis betulifolia NA Megahit NCBI (PRJNA393611: SRR5892022) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.456 399.2893629 East Asian species EA_SRR5892025 Vitis betulifolia NA Megahit NCBI (PRJNA393611: SRR5892025) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.612 392.5455742 East Asian species EA_SRR5891871 Vitis chunganensis NA Megahit NCBI (PRJNA393611: SRR5891871) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.623 406.1150675 East Asian species EA_SRR5891872 Vitis chunganensis NA Megahit NCBI (PRJNA393611: SRR5891872) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.672 447.6777611 East Asian species EA_SRR5891870 Vitis chungii NA Megahit NCBI (PRJNA393611: SRR5891870) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.712 452.8332062 East Asian species EA_SRR5892024 Vitis chungii NA Megahit NCBI (PRJNA393611: SRR5892024) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.634 407.8106012 East Asian species EA_SRR5891698 Vitis coignetiae Crimson Gloryvine Megahit NCBI (PRJNA393611: SRR5891698) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.389 420.847353 East Asian species EA_SRR5891699 Vitis coignetiae Crimson Gloryvine Megahit NCBI (PRJNA393611: SRR5891699) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.606 405.4988241 East Asian species EA_SRR5891873 Vitis coignetiae Crimson Gloryvine Megahit NCBI (PRJNA393611: SRR5891873) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.444 388.2324152 East Asian species EA_SRR769841 Vitis coignetiae NA Megahit NCBI (PRJNA192798: SRR769841) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.051 119.6617212 East Asian species EA_SRR769837 Vitis davidii NA Megahit NCBI (PRJNA192798: SRR769837) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.027 71.5647459 North American species NA_GCA_001562795.1 Vitis aestivalis Norton GCA_001562795.1_Norton_MSU1.0 NCBI (PRJNA302606) The assembled contigs was directly cited. NA NA 0.302 429.3758059 East Asian species EA_SRR5891700 Vitis davidii NA Megahit NCBI (PRJNA393611: SRR5891700) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.343 388.6751595 East Asian species EA_SRR5891701 Vitis davidii NA Megahit NCBI (PRJNA393611: SRR5891701) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.378 444.116951 East Asian species EA_SRR5891755 Vitis davidii NA Megahit NCBI (PRJNA393611: SRR5891755) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.566 454.2621908 East Asian species EA_SRR5892040 Vitis ficifolia Vitis thunbergii Megahit NCBI (PRJNA393611: SRR5892040) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.541 437.8811979 East Asian species EA_SRR5892041 Vitis ficifolia Vitis thunbergii Megahit NCBI (PRJNA393611: SRR5892041) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.517 470.5908146 East Asian species EA_SRR6877425 Vitis flexuosa NA Megahit NCBI (PRJNA445217: SRR6877425, SRR6877426, SRR6877427, SRR6877428) Illumina HiSeq 2000 PAIRED Developing Useful Genes and Markers for Molecular Breeding System By Omics Analysis in Grapevines (머루 및 포도 비교유전체 연구를 통한 분자육종시스템 구축 및 관련 Omics 통합 DB by 윤해근) 0.417 445.4064369 East Asian species EA_SRR7662541 Vitis flexuosa NA Megahit NCBI (PRJNA388292: SRR7662541) Illumina HiSeq 4000 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.577 630.8370113 East Asian species EA_SRR5891946 Vitis flexuosa NA Megahit NCBI (PRJNA393611: SRR5891946) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.331 426.5799961 East Asian species EA_SRR5892015 Vitis hancockii NA Megahit NCBI (PRJNA393611: SRR5892015) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.562 408.0064812 East Asian species EA_SRR5891947 Vitis heyneana ssp. heyneana NA Megahit NCBI (PRJNA393611: SRR5891947) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.727 446.208313 East Asian species EA_SRR5892014 Vitis lanceolatifoliosa NA Megahit NCBI (PRJNA393611: SRR5892014) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.729 434.217617 East Asian species EA_SRR5892013 Vitis piasezkii Maxim var. liubaensis NA Megahit NCBI (PRJNA393611: SRR5892013) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.475 474.1467247 East Asian species EA_SRR5892012 Vitis pseudoreticulata NA Megahit NCBI (PRJNA393611: SRR5892012) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.487 457.5851126 East Asian species EA_SRR5892035 Vitis pseudoreticulata NA Megahit NCBI (PRJNA393611: SRR5892035) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.586 540.0045385 East Asian species EA_SRR5891944 Vitis quinquangularis NA Megahit NCBI (PRJNA393611: SRR5891944) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.461 456.7324972 East Asian species EA_SRR5891945 Vitis retordii Roman NA Megahit NCBI (PRJNA393611: SRR5891945) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.724 465.6792364 East Asian species EA_SRR5891621 Vitis romanetii NA Megahit NCBI (PRJNA393611: SRR5891621) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.597 432.5826616 East Asian species EA_SRR5891622 Vitis romanetii NA Megahit NCBI (PRJNA393611: SRR5891622) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.418 412.510685 East Asian species EA_SRR8699315 Vitis romanetii C-166-026 Megahit NCBI (PRJNA281110: SRR8699315) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.627 354.3959122 East Asian species EA_SRR5891932 Vitis shenxiensis NA Megahit NCBI (PRJNA393611: SRR5891932) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.652 441.0711346 East Asian species EA_SRR5892034 Vitis shenxiensis NA Megahit NCBI (PRJNA393611: SRR5892034) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.319 420.4978647 East Asian species EA_SRR769838 Vitis thunbergii NA Megahit NCBI (PRJNA192798: SRR769838) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.083 132.0610123 East Asian species EA_SRR5891929 Vitis tsoii NA Megahit NCBI (PRJNA393611: SRR5891929) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.748 442.736598 East Asian species EA_SRR5891952 Vitis wuhanensis NA Megahit NCBI (PRJNA393611: SRR5891952) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.67 429.4794474 East Asian species EA_SRR5891953 Vitis wuhanensis NA Megahit NCBI (PRJNA393611: SRR5891953) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.61 417.8409338 East Asian species EA_SRR5891948 Vitis yunnanensis NA Megahit NCBI (PRJNA393611: SRR5891948) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.528 418.4182529 East Asian species EA_SRR5891758 Vitis erythrophylla  NA Megahit NCBI (PRJNA393611: SRR5891758) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.685 428.3000154 Eurasian species VV_GCA_002922885.1 Vitis vinifera Chkhaveri GCA_002922885.1_Chkhaveri_assembly01 NCBI (PRJDB5761) The assembled contigs was directly cited. NA Tabidze V, Pipia I, Gogniashvili M, et al. Whole genome comparative analysis of four Georgian grape cultivars[J]. Molecular Genetics and Genomics, 2017, 292(6): 1377-1389. 0.865 398.1461477 Eurasian species VV_GCA_002923015.1 Vitis vinifera Saperavi GCA_002923015.1_Saperavi_assembly01 NCBI (PRJDB5761) The assembled contigs was directly cited. NA Tabidze V, Pipia I, Gogniashvili M, et al. Whole genome comparative analysis of four Georgian grape cultivars[J]. Molecular Genetics and Genomics, 2017, 292(6): 1377-1389. 0.865 398.0211678 Eurasian species VV_GCA_002923105.1 Vitis vinifera Meskhetian Green GCA_002923105.1_Meskhetian_assembly01 NCBI (PRJDB5761) The assembled contigs was directly cited. NA Tabidze V, Pipia I, Gogniashvili M, et al. Whole genome comparative analysis of four Georgian grape cultivars[J]. Molecular Genetics and Genomics, 2017, 292(6): 1377-1389. 0.865 398.1842155 Eurasian species VV_GCA_002923165.1 Vitis vinifera Rkatsiteli GCA_002923165.1_Rkatsiteli_assembly01 NCBI (PRJDB5761) The assembled contigs was directly cited. NA Tabidze V, Pipia I, Gogniashvili M, et al. Whole genome comparative analysis of four Georgian grape cultivars[J]. Molecular Genetics and Genomics, 2017, 292(6): 1377-1389. 0.865 397.6162672 Eurasian species VV_GCA_004011995.1 Vitis vinifera Chardonnay clone I10V1 GCA_004011995.1_AWRI_Vv-CHD_1.0 NCBI (PRJNA399599) The assembled contigs was directly cited. NA Roach M J, Johnson D L, Bohlmann J, et al. Population sequencing reveals clonal diversity and ancestral inbreeding in the grapevine cultivar Chardonnay[J]. PLoS genetics, 2018, 14(11): e1007807. 0.98 827.8970804 Inter-species IS_GCA_008326845.1 Vitis labruscana × Vitis vinifera Shine Muscat GCA_008326845.1_VSMuph_r1.0 NCBI (PRJDB8610) The assembled contigs was directly cited. NA Shirasawa K, Azuma A, Taniguchi F, et al. De novo whole-genome assembly in interspecific hybrid table grape,‘Shine Muscat’[J]. bioRxiv, 2019: 730762. 0.897 452.247324 Eurasian species VV_GCA_011037095.1 Vitis vinifera Chardonnay clone 04 GCA_011037095.1_Chardonnay04 NCBI (PRJNA550461) The assembled contigs was directly cited. NA Zhou Y, Minio A, Massonnet M, et al. The population genetics of structural variants in grapevine domestication[J]. Nature plants, 2019, 5(9): 965-979. 0.964 573.236577 Inter-species IS_GCA_011039315.1 Vitis labrusca (Vitis labrusca × Vitis vinifera) Concord GCA_011039315.1_ASM1103931v1 NCBI (PRJNA606024) The assembled contigs was directly cited. NA Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.767 481.6794825 Eurasian species VV_ERR514999 Vitis vinifera Gewurztraminer Megahit NCBI (PRJEB6378: ERR514999) Illumina HiSeq 2000 PAIRED Leonardelli L. Grapevine acidity: SVM tool development and NGS data analyses[J]. 2014. 0.561 518.6195669 Eurasian species VV_SRR10439055 Vitis vinifera Muscat Hamburg Megahit NCBI (PRJNA589353: SRR10439055) HiSeq X Ten PAIRED Sun L, Li S, Jiang J, et al. New quantitative trait locus (QTLs) and candidate genes associated with the grape berry color trait identified based on a high-density genetic map[J]. BMC Plant Biology, 2020, 20(1): 1-13. 0.726 513.1094027 Eurasian species VV_SRR11078314 Vitis vinifera Semillon Megahit NCBI (PRJNA606045: SRR11078314) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.598 473.4505625 Eurasian species VV_SRR11234330 Vitis vinifera Koshu Megahit NCBI (PRJNA610156: SRR11234330) Illumina Genome Analyzer IIx PAIRED Tanaka K, Hamaguchi Y, Suzuki S, et al. Genomic Characterization of the Japanese Indigenous Wine Grape Vitis sp. cv. Koshu[J]. Frontiers in Plant Science, 2020, 11: 1629. 0.647 466.2499409 Eurasian species VV_SRR11787836 Vitis vinifera Munage Megahit NCBI (PRJNA632683: SRR11787836) HiSeq X Ten PAIRED Zhong H, Zhang F, Zhou X, et al. Genome-wide identification of sequence variations and SSR marker development in the Munake grape cultivar[J]. Frontiers in Ecology and Evolution, 2021, 9: 190. 0.714 481.291111 Eurasian species VV_SRR12265740 Vitis vinifera Bustan Megahit NCBI (PRJNA647155: SRR12265740) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.196 201.6982374 Eurasian species VV_SRR12265741 Vitis vinifera Bufalo Megahit NCBI (PRJNA647155: SRR12265741) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.622 418.6102762 Eurasian species VV_SRR12265742 Vitis vinifera Bituni-T Megahit NCBI (PRJNA647155: SRR12265742) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.626 390.5805683 Eurasian species VV_SRR12265743 Vitis vinifera Beer Megahit NCBI (PRJNA647155: SRR12265743) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.219 269.5394382 Eurasian species VV_SRR12265744 Vitis vinifera Zuba-A Megahit NCBI (PRJNA647155: SRR12265744) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.58 374.8461714 Eurasian species VV_SRR12265745 Vitis vinifera Zeni-A Megahit NCBI (PRJNA647155: SRR12265745) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.236 246.4448948 Eurasian species VV_SRR12265746 Vitis vinifera Zeituni Megahit NCBI (PRJNA647155: SRR12265746) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.597 404.2838898 Eurasian species VV_SRR12265747 Vitis vinifera Yakim Megahit NCBI (PRJNA647155: SRR12265747) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.586 410.578639 Eurasian species VV_SRR12265748 Vitis vinifera Yael Megahit NCBI (PRJNA647155: SRR12265748) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.287 244.679616 Eurasian species VV_SRR12265750 Vitis vinifera Tanur Megahit NCBI (PRJNA647155: SRR12265750) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.636 421.6811533 Eurasian species VV_SRR12265751 Vitis vinifera Tamar-H2 Megahit NCBI (PRJNA647155: SRR12265751) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.546 399.2193947 Eurasian species VV_SRR12265752 Vitis vinifera Tamar-H1 Megahit NCBI (PRJNA647155: SRR12265752) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.229 229.4816027 Eurasian species VV_SRR12265753 Vitis vinifera Suriman Megahit NCBI (PRJNA647155: SRR12265753) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.502 345.0972929 Eurasian species VV_SRR12265754 Vitis vinifera Suka Megahit NCBI (PRJNA647155: SRR12265754) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.598 408.9783344 Eurasian species VV_SRR12265755 Vitis vinifera Sikusi Megahit NCBI (PRJNA647155: SRR12265755) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.634 422.0527067 Eurasian species VV_SRR12265756 Vitis vinifera Shami Megahit NCBI (PRJNA647155: SRR12265756) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.604 375.5336447 Eurasian species VV_SRR12265758 Vitis vinifera Safsufa-W Megahit NCBI (PRJNA647155: SRR12265758) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.645 404.9087334 Eurasian species VV_SRR12265759 Vitis vinifera Safsufa-R Megahit NCBI (PRJNA647155: SRR12265759) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.593 366.9556093 Eurasian species VV_SRR12265760 Vitis vinifera Baluti Megahit NCBI (PRJNA647155: SRR12265760) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.489 298.4705257 Eurasian species VV_SRR12265761 Vitis vinifera Rumi Megahit NCBI (PRJNA647155: SRR12265761) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.365 298.2458563 Eurasian species VV_SRR12265762 Vitis vinifera Ramtania Megahit NCBI (PRJNA647155: SRR12265762) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.568 375.8866262 Eurasian species VV_SRR12265764 Vitis vinifera Orcha Megahit NCBI (PRJNA647155: SRR12265764) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.562 366.6560535 Eurasian species VV_SRR12265765 Vitis vinifera Nizanim-P Megahit NCBI (PRJNA647155: SRR12265765) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.612 399.3732796 Eurasian species VV_SRR12265767 Vitis vinifera Matar Megahit NCBI (PRJNA647155: SRR12265767) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.668 451.9078093 Eurasian species VV_SRR12265768 Vitis vinifera Margaliot-1 Megahit NCBI (PRJNA647155: SRR12265768) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.612 385.7094784 Eurasian species VV_SRR12265769 Vitis vinifera Marawi-BG Megahit NCBI (PRJNA647155: SRR12265769) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.632 345.0853624 Eurasian species VV_SRR12265770 Vitis vinifera Marawi Megahit NCBI (PRJNA647155: SRR12265770) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.611 385.885807 Eurasian species VV_SRR12265771 Vitis vinifera Ayarim3 Megahit NCBI (PRJNA647155: SRR12265771) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.303 299.5133734 Eurasian species VV_SRR12265772 Vitis vinifera Marawani-GH Megahit NCBI (PRJNA647155: SRR12265772) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.58 363.7875013 Eurasian species VV_SRR12265773 Vitis vinifera Marawani Megahit NCBI (PRJNA647155: SRR12265773) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.571 382.2885227 Eurasian species VV_SRR12265777 Vitis vinifera Madawar Megahit NCBI (PRJNA647155: SRR12265777) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.572 393.8552732 Eurasian species VV_SRR12265778 Vitis vinifera Kursi Megahit NCBI (PRJNA647155: SRR12265778) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.623 402.1142645 Eurasian species VV_SRR12265780 Vitis vinifera Karkashani Megahit NCBI (PRJNA647155: SRR12265780) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.534 375.2268057 Eurasian species VV_SRR12265782 Vitis vinifera Ayarim1 Megahit NCBI (PRJNA647155: SRR12265782) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.517 363.7316151 Eurasian species VV_SRR12265784 Vitis vinifera Jurdich Megahit NCBI (PRJNA647155: SRR12265784) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.609 387.6009989 Eurasian species VV_SRR12265785 Vitis vinifera Jandaly Megahit NCBI (PRJNA647155: SRR12265785) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.638 353.9861908 Eurasian species VV_SRR12265786 Vitis vinifera Homra Megahit NCBI (PRJNA647155: SRR12265786) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.531 347.9238033 Eurasian species VV_SRR12265787 Vitis vinifera Hilwani Megahit NCBI (PRJNA647155: SRR12265787) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.643 442.3002872 Eurasian species VV_SRR12265788 Vitis vinifera Hadari Megahit NCBI (PRJNA647155: SRR12265788) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.667 450.318902 Eurasian species VV_SRR12265789 Vitis vinifera Gilboa Megahit NCBI (PRJNA647155: SRR12265789) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.583 386.8286343 Eurasian species VV_SRR12265790 Vitis vinifera El-Al Megahit NCBI (PRJNA647155: SRR12265790) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.371 315.2519283 Eurasian species VV_SRR12265791 Vitis vinifera Darwishi Megahit NCBI (PRJNA647155: SRR12265791) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.548 382.0670938 Eurasian species VV_SRR12265792 Vitis vinifera Dabuki-M Megahit NCBI (PRJNA647155: SRR12265792) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.046 120.0788736 Eurasian species VV_SRR12265793 Vitis vinifera Asba-el-arus Megahit NCBI (PRJNA647155: SRR12265793) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.665 445.962389 Eurasian species VV_SRR12265794 Vitis vinifera Amud Megahit NCBI (PRJNA647155: SRR12265794) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.548 420.2856045 Eurasian species VV_SRR12328988 Vitis vinifera Petite-Sirah Megahit NCBI (PRJNA647155: SRR12328988) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.719 536.8910179 Eurasian species VV_SRR12328989 Vitis vinifera Carignan Megahit NCBI (PRJNA647155: SRR12328989) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.213 217.0987053 Eurasian species VV_SRR12328990 Vitis vinifera French-colombard Megahit NCBI (PRJNA647155: SRR12328990) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.183 192.2427711 Eurasian species VV_SRR12328991 Vitis vinifera Shiraz Megahit NCBI (PRJNA647155: SRR12328991) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.347 317.6319513 Eurasian species VV_SRR12693666 Vitis vinifera Malbec C225 Megahit NCBI (PRJNA663442: SRR12693666) Illumina HiSeq 2000 PAIRED Calderón L, Mauri N, Muñoz C, et al. Whole genome resequencing and custom genotyping unveil clonal lineages in ‘Malbec’grapevines (Vitis vinifera L.)[J]. Scientific reports, 2021, 11(1): 1-11. 0.673 475.0523348 Eurasian species VV_SRR12693667 Vitis vinifera Malbec C143 Megahit NCBI (PRJNA663442: SRR12693667) Illumina HiSeq 2000 PAIRED Calderón L, Mauri N, Muñoz C, et al. Whole genome resequencing and custom genotyping unveil clonal lineages in ‘Malbec’grapevines (Vitis vinifera L.)[J]. Scientific reports, 2021, 11(1): 1-11. 0.675 448.2397747 Eurasian species VV_SRR12693668 Vitis vinifera Malbec MB59 Megahit NCBI (PRJNA663442: SRR12693668) Illumina HiSeq 2000 PAIRED Calderón L, Mauri N, Muñoz C, et al. Whole genome resequencing and custom genotyping unveil clonal lineages in ‘Malbec’grapevines (Vitis vinifera L.)[J]. Scientific reports, 2021, 11(1): 1-11. 0.684 479.8954191 Eurasian species VV_SRR12693669 Vitis vinifera Malbec MB53 Megahit NCBI (PRJNA663442: SRR12693669) Illumina HiSeq 2000 PAIRED Calderón L, Mauri N, Muñoz C, et al. Whole genome resequencing and custom genotyping unveil clonal lineages in ‘Malbec’grapevines (Vitis vinifera L.)[J]. Scientific reports, 2021, 11(1): 1-11. 0.672 482.7226028 Eurasian species VV_SRR2015301 Vitis vinifera Riesling Megahit NCBI (PRJNA283439: SRR2015301) Illumina HiSeq 2000 PAIRED Yang Y, Mao L, Jittayasothorn Y, et al. Messenger RNA exchange between scions and rootstocks in grafted grapevines[J]. BMC plant biology, 2015, 15(1): 1-14. 0.668 461.6187296 Eurasian species VV_SRR2895164 Vitis vinifera Tempranillo Tinto Megahit NCBI (PRJNA301084: SRR2895164) Illumina HiSeq 2000 PAIRED Carbonell-Bejerano P, Royo C, Torres-Pérez R, et al. Catastrophic unbalanced genome rearrangements cause somatic loss of berry color in grapevine[J]. Plant physiology, 2017, 175(2): 786-801. 0.673 325.9838924 Eurasian species VV_SRR2895165 Vitis vinifera Tempranillo Blanco Megahit NCBI (PRJNA301084: SRR2895165) Illumina HiSeq 2000 PAIRED Carbonell-Bejerano P, Royo C, Torres-Pérez R, et al. Catastrophic unbalanced genome rearrangements cause somatic loss of berry color in grapevine[J]. Plant physiology, 2017, 175(2): 786-801. 0.689 325.7157593 Eurasian species VV_SRR2967092 Vitis vinifera Summer Black bud mutation Megahit NCBI (PRJNA304490: SRR2967092) Illumina HiSeq 2000 PAIRED NA 0.52 286.2730293 Eurasian species VV_SRR3496931 Vitis vinifera Nitzanim_Bustan Megahit NCBI (PRJNA321237: SRR3496931) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.196 201.5357828 Eurasian species VV_SRR3508973 Vitis vinifera Nitzan3 Megahit NCBI (PRJNA321237: SRR3508973) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.287 244.4937115 Eurasian species VV_SRR3509357 Vitis vinifera Pinot Gris Megahit NCBI (PRJNA321480: SRR3509357, SRR3509358) Illumina HiSeq 2000 PAIRED Marroni F, Scaglione D, Pinosio S, et al. Reduction of heterozygosity (ROH) as a method to detect mosaic structural variation[J]. Plant biotechnology journal, 2017, 15(7): 791. 0.606 346.3545656 Eurasian species VV_SRR3509359 Vitis vinifera Pinot Blanc Megahit NCBI (PRJNA321480: SRR3509359, SRR3509360, SRR3509361, SRR3509362) Illumina HiSeq 2000 PAIRED Marroni F, Scaglione D, Pinosio S, et al. Reduction of heterozygosity (ROH) as a method to detect mosaic structural variation[J]. Plant biotechnology journal, 2017, 15(7): 791. 0.648 416.0530901 Eurasian species VV_SRR3509363 Vitis vinifera Pinot Meunier Megahit NCBI (PRJNA321480: SRR3509363, SRR3509364, SRR3509365, SRR3509366) Illumina HiSeq 2000 PAIRED Marroni F, Scaglione D, Pinosio S, et al. Reduction of heterozygosity (ROH) as a method to detect mosaic structural variation[J]. Plant biotechnology journal, 2017, 15(7): 791. 0.677 442.2055607 Eurasian species VV_SRR3509718 Vitis vinifera Baluti Megahit NCBI (PRJNA321237: SRR3509718) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.316 298.3156528 Eurasian species VV_SRR3509720 Vitis vinifera Marawi Megahit NCBI (PRJNA321237: SRR3509720) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.611 344.9247313 Eurasian species VV_SRR3528127 Vitis vinifera Dabuki Megahit NCBI (PRJNA321237: SRR3528127) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.046 119.9326773 Eurasian species VV_SRR3528198 Vitis vinifera Jandali Megahit NCBI (PRJNA321237: SRR3528198) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.628 353.8278532 Eurasian species VV_SRR354198 Vitis vinifera Italia Megahit NCBI (SRP009057: SRR354198) Illumina HiSeq 2000 PAIRED Cardone M F, D'Addabbo P, Alkan C, et al. Inter‐varietal structural variation in grapevine genomes[J]. The Plant Journal, 2016, 88(4): 648-661. 0.251 177.2949371 Eurasian species VV_SRR354199 Vitis vinifera Autumn Royal Megahit NCBI (SRP009057: SRR354199) Illumina HiSeq 2000 PAIRED Cardone M F, D'Addabbo P, Alkan C, et al. Inter‐varietal structural variation in grapevine genomes[J]. The Plant Journal, 2016, 88(4): 648-661. 0.15 139.5017462 Eurasian species VV_SRR354200 Vitis vinifera Thompson Seedless Megahit NCBI (SRP009057: SRR354200) Illumina HiSeq 2000 PAIRED Cardone M F, D'Addabbo P, Alkan C, et al. Inter‐varietal structural variation in grapevine genomes[J]. The Plant Journal, 2016, 88(4): 648-661. 0.301 189.0835285 Eurasian species VV_SRR354201 Vitis vinifera Red Globe Megahit NCBI (SRP009057: SRR354201) Illumina HiSeq 2000 PAIRED Cardone M F, D'Addabbo P, Alkan C, et al. Inter‐varietal structural variation in grapevine genomes[J]. The Plant Journal, 2016, 88(4): 648-661. 0.195 141.9619999 Eurasian species VV_SRR3990781 Vitis vinifera Pinot noir Megahit NCBI (PRJNA321480: SRR3990781, SRR3990782) Illumina HiSeq 2000 PAIRED Marroni F, Scaglione D, Pinosio S, et al. Reduction of heterozygosity (ROH) as a method to detect mosaic structural variation[J]. Plant biotechnology journal, 2017, 15(7): 791. 0.637 379.0902147 Eurasian species VV_SRR5506711 Vitis vinifera Sangiovese Megahit NCBI (PRJNA385116: SRR5506711, SRR5506712, SRR5506713, SRR5506714, SRR5506715, SRR5506716) Illumina HiSeq 2000;Illumina Genome Analyzer II;Illumina Genome Analyzer II;Illumina HiSeq 2000;Illumina Genome Analyzer II;Illumina Genome Analyzer II PAIRED Dal Santo S, Zenoni S, Sandri M, et al. Grapevine field experiments reveal the contribution of genotype, the influence of environment and the effect of their interaction (G× E) on the berry transcriptome[J]. The Plant Journal, 2018, 93(6): 1143-1159. 0.675 461.8220224 Eurasian species VV_SRR5626056 Vitis vinifera Nebbiolo CVT71 Megahit NCBI (PRJNA387534: SRR5626056) Illumina HiSeq 1000 PAIRED Gambino G, Dal Molin A, Boccacci P, et al. Whole-genome sequencing and SNV genotyping of ‘Nebbiolo’(Vitis vinifera L.) clones[J]. Scientific reports, 2017, 7(1): 1-15. 0.678 462.2193041 Eurasian species VV_SRR5626393 Vitis vinifera Nebbiolo CVT185 Megahit NCBI (PRJNA387534: SRR5626393) Illumina HiSeq 1000 PAIRED Gambino G, Dal Molin A, Boccacci P, et al. Whole-genome sequencing and SNV genotyping of ‘Nebbiolo’(Vitis vinifera L.) clones[J]. Scientific reports, 2017, 7(1): 1-15. 0.696 440.1381416 Eurasian species VV_SRR5626750 Vitis vinifera Nebbiolo CVT423 Megahit NCBI (PRJNA387534: SRR5626750) Illumina HiSeq 1000 PAIRED Gambino G, Dal Molin A, Boccacci P, et al. Whole-genome sequencing and SNV genotyping of ‘Nebbiolo’(Vitis vinifera L.) clones[J]. Scientific reports, 2017, 7(1): 1-15. 0.693 474.9916372 Eurasian species VV_SRR5627780 Vitis vinifera Thompson RLK Megahit NCBI (PRJNA388292: SRR5627780) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.638 429.526226 Eurasian species VV_SRR5627781 Vitis vinifera Muscat of Alexandria Megahit NCBI (PRJNA388292: SRR5627781) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.684 443.9292917 Eurasian species VV_SRR5627782 Vitis vinifera Thompson 2A Megahit NCBI (PRJNA388292: SRR5627782) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.658 444.3644314 Eurasian species VV_SRR5627788 Vitis vinifera Muscadine Megahit NCBI (PRJNA388292: SRR5627788) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.722 439.0769281 Eurasian species VV_SRR5627793 Vitis vinifera Semillion Megahit NCBI (PRJNA388292: SRR5627793) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.657 428.6106424 Eurasian species VV_SRR5627794 Vitis vinifera Riesling Megahit NCBI (PRJNA388292: SRR5627794) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.661 439.0258904 Eurasian species VV_SRR5627795 Vitis vinifera Cabernet Sauvignon Megahit NCBI (PRJNA388292: SRR5627795) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.665 432.1631021 Eurasian species VV_SRR5627796 Vitis vinifera Primitivo Megahit NCBI (PRJNA388292: SRR5627796) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.695 476.8329 Eurasian species VV_SRR5627797 Vitis vinifera Pinot Noir Megahit NCBI (PRJNA388292: SRR5627797) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.675 450.0187016 Eurasian species VV_SRR5627798 Vitis vinifera Gamay Noir Megahit NCBI (PRJNA388292: SRR5627798) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.656 422.010006 Eurasian species VV_SRR5627799 Vitis vinifera Chardonnay Megahit NCBI (PRJNA388292: SRR5627799) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.689 445.8463316 Eurasian species VV_SRR5627800 Vitis vinifera Aramon Megahit NCBI (PRJNA388292: SRR5627800) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.68 461.8976803 Eurasian species VV_SRR5627801 Vitis vinifera Zinfandel Megahit NCBI (PRJNA388292: SRR5627801) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.679 502.9092226 Eurasian species VV_SRR5627802 Vitis vinifera Traminer Megahit NCBI (PRJNA388292: SRR5627802) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.621 402.8911266 Eurasian species VV_SRR5712111 Vitis vinifera Kishmish vatkana Megahit NCBI (PRJNA390884: SRR5712111) Illumina HiSeq 2500 PAIRED Canaguier A, Grimplet J, Di Gaspero G, et al. A new version of the grapevine reference genome assembly (12X. v2) and of its annotation (VCost. v3)[J]. Genomics data, 2017, 14: 56. 0.27 234.4140882 Eurasian species VV_SRR5803836 Vitis vinifera Cannonau Megahit NCBI (PRJNA392287: SRR5803836) Illumina HiSeq 2000 PAIRED Mercenaro L, Nieddu G, Porceddu A, et al. Sequence polymorphisms and structural variations among four grapevine (Vitis vinifera L.) cultivars representing Sardinian agriculture[J]. Frontiers in plant science, 2017, 8: 1279. 0.607 348.6120472 Eurasian species VV_SRR5803837 Vitis vinifera Bovale Sardo Megahit NCBI (PRJNA392287: SRR5803837) Illumina HiSeq 2000 PAIRED Mercenaro L, Nieddu G, Porceddu A, et al. Sequence polymorphisms and structural variations among four grapevine (Vitis vinifera L.) cultivars representing Sardinian agriculture[J]. Frontiers in plant science, 2017, 8: 1279. 0.215 201.7816963 Eurasian species VV_SRR5803838 Vitis vinifera Vermentino Megahit NCBI (PRJNA392287: SRR5803838) Illumina HiSeq 2000 PAIRED Mercenaro L, Nieddu G, Porceddu A, et al. Sequence polymorphisms and structural variations among four grapevine (Vitis vinifera L.) cultivars representing Sardinian agriculture[J]. Frontiers in plant science, 2017, 8: 1279. 0.318 265.7024498 Eurasian species VV_SRR5803839 Vitis vinifera Carignano Megahit NCBI (PRJNA392287: SRR5803839) Illumina HiSeq 2000 PAIRED Mercenaro L, Nieddu G, Porceddu A, et al. Sequence polymorphisms and structural variations among four grapevine (Vitis vinifera L.) cultivars representing Sardinian agriculture[J]. Frontiers in plant science, 2017, 8: 1279. 0.513 269.9140425 Eurasian species VV_SRR5891597 Vitis vinifera Ruby Ohkubo Megahit NCBI (PRJNA393611: SRR5891597) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.631 415.241519 Eurasian species VV_SRR5891598 Vitis vinifera Suntory Blanc Megahit NCBI (PRJNA393611: SRR5891598) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.44 444.0744095 Eurasian species VV_SRR5891599 Vitis vinifera Clone 96-2 Megahit NCBI (PRJNA393611: SRR5891599) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.697 473.8523741 Eurasian species VV_SRR5891601 Vitis vinifera Riesling Lion Megahit NCBI (PRJNA393611: SRR5891601) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.686 504.1185331 Eurasian species VV_SRR5891602 Vitis vinifera Rizamat (4N) Megahit NCBI (PRJNA393611: SRR5891602) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.424 398.7871399 Eurasian species VV_SRR5891603 Vitis vinifera Misiheyi Megahit NCBI (PRJNA393611: SRR5891603) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.483 382.7874403 Eurasian species VV_SRR5891604 Vitis vinifera Rose Ciotat Megahit NCBI (PRJNA393611: SRR5891604) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.648 447.8559933 Eurasian species VV_SRR5891615 Vitis vinifera Ruby Okuyama Megahit NCBI (PRJNA393611: SRR5891615) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.256 351.648468 Eurasian species VV_SRR5891616 Vitis vinifera Kirovabadsky Megahit NCBI (PRJNA393611: SRR5891616) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.553 411.6463032 Eurasian species VV_SRR5891619 Vitis vinifera Bayan Shirei Megahit NCBI (PRJNA393611: SRR5891619) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.545 404.0359392 Eurasian species VV_SRR5891620 Vitis vinifera Silvaner Gruen Megahit NCBI (PRJNA393611: SRR5891620) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.331 364.6184292 Eurasian species VV_SRR5891625 Vitis vinifera Flame Seedless Megahit NCBI (PRJNA393611: SRR5891625) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.609 411.794385 Eurasian species VV_SRR5891628 Vitis vinifera Centennial Seedless Megahit NCBI (PRJNA393611: SRR5891628) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.632 470.3016472 Eurasian species VV_SRR5891629 Vitis vinifera Christmas Rose Megahit NCBI (PRJNA393611: SRR5891629) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.443 353.1607494 Eurasian species VV_SRR5891630 Vitis vinifera Crimson Seedless Megahit NCBI (PRJNA393611: SRR5891630) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.483 394.4733353 Eurasian species VV_SRR5891632 Vitis vinifera Dawn Seedless Megahit NCBI (PRJNA393611: SRR5891632) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.43 416.1079731 Eurasian species VV_SRR5891633 Vitis vinifera Emperor Megahit NCBI (PRJNA393611: SRR5891633) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.279 341.8663034 Eurasian species VV_SRR5891634 Vitis vinifera Exotic Megahit NCBI (PRJNA393611: SRR5891634) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.594 429.2381487 Eurasian species VV_SRR5891635 Vitis vinifera Cubupbkabbiu Megahit NCBI (PRJNA393611: SRR5891635) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.648 429.4224644 Eurasian species VV_SRR5891636 Vitis vinifera Cannero Megahit NCBI (PRJNA393611: SRR5891636) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.532 411.6973705 Eurasian species VV_SRR5891639 Vitis vinifera Bimeijia Megahit NCBI (PRJNA393611: SRR5891639) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.279 325.1610022 Eurasian species VV_SRR5891640 Vitis vinifera Benibarao Megahit NCBI (PRJNA393611: SRR5891640) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.689 472.5067186 Eurasian species VV_SRR5891641 Vitis vinifera Black ballade (4N) Megahit NCBI (PRJNA393611: SRR5891641) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.524 420.2006226 Eurasian species VV_SRR5891642 Vitis vinifera Black Baladi Megahit NCBI (PRJNA393611: SRR5891642) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.681 409.240078 Eurasian species VV_SRR5891643 Vitis vinifera Bujiesuli Megahit NCBI (PRJNA393611: SRR5891643) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.61 406.1760263 Eurasian species VV_SRR5891644 Vitis vinifera Black Hamburg Megahit NCBI (PRJNA393611: SRR5891644) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.498 385.543642 Eurasian species VV_SRR5891655 Vitis vinifera Pin10-3 Megahit NCBI (PRJNA393611: SRR5891655) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.563 438.2265768 Eurasian species VV_SRR5891656 Vitis vinifera Clone 97-4-10 Megahit NCBI (PRJNA393611: SRR5891656) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.736 449.8893433 Eurasian species VV_SRR5891657 Vitis vinifera Clone 97-4-9 Megahit NCBI (PRJNA393611: SRR5891657) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.629 399.3689833 Eurasian species VV_SRR5891658 Vitis vinifera Clone 97-3-13 Megahit NCBI (PRJNA393611: SRR5891658) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.692 446.3032951 Eurasian species VV_SRR5891659 Vitis vinifera Clone 96-1 Megahit NCBI (PRJNA393611: SRR5891659) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.549 443.0385942 Eurasian species VV_SRR5891660 Vitis vinifera Clone 97-4-1 Megahit NCBI (PRJNA393611: SRR5891660) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.631 425.7715244 Eurasian species VV_SRR5891661 Vitis vinifera Clone 97-3-16 Megahit NCBI (PRJNA393611: SRR5891661) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.665 448.2243881 Eurasian species VV_SRR5891680 Vitis vinifera Lady''s Finger Megahit NCBI (PRJNA393611: SRR5891680) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.617 436.487359 Eurasian species VV_SRR5891681 Vitis vinifera Khoussaine Kalim Barmak Megahit NCBI (PRJNA393611: SRR5891681) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.655 432.0106201 Eurasian species VV_SRR5891682 Vitis vinifera Zana Megahit NCBI (PRJNA393611: SRR5891682) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.511 425.6615677 Eurasian species VV_SRR5891683 Vitis vinifera Flame Tokay Megahit NCBI (PRJNA393611: SRR5891683) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.499 392.3933134 Eurasian species VV_SRR5891686 Vitis vinifera JingYu Megahit NCBI (PRJNA393611: SRR5891686) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.39 386.269311 Eurasian species VV_SRR5891687 Vitis vinifera Jingyan Megahit NCBI (PRJNA393611: SRR5891687) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.348 371.1967764 Eurasian species VV_SRR5891688 Vitis vinifera Myxyaohu Megahit NCBI (PRJNA393611: SRR5891688) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.706 471.9308529 Eurasian species VV_SRR5891689 Vitis vinifera Jingzaojing Megahit NCBI (PRJNA393611: SRR5891689) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.508 420.4731417 Eurasian species VV_SRR5891690 Vitis vinifera Manai Megahit NCBI (PRJNA393611: SRR5891690) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.645 446.182394 Eurasian species VV_SRR5891691 Vitis vinifera Lizixiang Megahit NCBI (PRJNA393611: SRR5891691) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.431 403.3709755 Eurasian species VV_SRR5891692 Vitis vinifera Xiangfei Megahit NCBI (PRJNA393611: SRR5891692) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.693 451.3950682 Eurasian species VV_SRR5891693 Vitis vinifera Pinger Putao Megahit NCBI (PRJNA393611: SRR5891693) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.285 352.0385542 Eurasian species VV_SRR5891694 Vitis vinifera Zaomanao Megahit NCBI (PRJNA393611: SRR5891694) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.581 400.533391 Eurasian species VV_SRR5891695 Vitis vinifera Yan 73 Megahit NCBI (PRJNA393611: SRR5891695) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.594 412.5683613 Eurasian species VV_SRR5891696 Vitis vinifera Red Alissa Megahit NCBI (PRJNA393611: SRR5891696) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.528 390.1255875 Eurasian species VV_SRR5891697 Vitis vinifera Precocious Neo-trout Megahit NCBI (PRJNA393611: SRR5891697) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.313 348.6370964 Vitis rotundifolia RO_GCA_015341995.1 Vitis rotundifolia Dixie GCA_015341995.1_Vitis_rotundifolia_hybrid_assembly NCBI (PRJNA649974) The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.782 439.8338919 East Asian species EA_GCA_016071775.1 Vitis amurensis IBCAS1988 GCA_016071775.1_V_amurensis_1.0 NCBI (PRJNA549877) The assembled contigs was directly cited. NA Wang Y, Xin H, Fan P, et al. The genome of Shanputao (Vitis amurensis) provides a new insight into cold tolerance of grapevine[J]. The Plant Journal, 2021, 105(6): 1495-1506. 0.92 571.8635921 Inter-species IS_GCA_022058775.1 Vitis hybrid cultivar Chambourcin GCA_022058775.1_Chambourcin NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.862 530.2905521 North American species NA_GCA_022058835.1 Vitis aestivalis var. linsecomii x Vitis rupestris Jaeger 70 GCA_022058835.1_Jaeger_70 NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.845 531.2072086 Inter-species IS_GCA_022058865.1 Vitis labrusca (Vitis labrusca × Vitis vinifera) Concord Grape\, Fox Grape GCA_022058865.1_Concord NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.861 515.8066092 Eurasian species VV_GCA_022058905.1 Vitis vinifera Flame Seedless GCA_022058905.1_Flame_Seedless NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.53 453.1736631 North American species NA_GCA_022059015.1 Vitis x doaniana CL_2021 GCA_022059015.1_CL_2021 NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.894 474.0231085 North American species NA_GCA_022059035.1 Vitis rupestris B38 GCA_022059035.1_B38 NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.86 517.5219612 Eurasian species VV_SRR5891722 Vitis vinifera Baiburuike Megahit NCBI (PRJNA393611: SRR5891722) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.355 355.7524252 Eurasian species VV_SRR5891723 Vitis vinifera Bailaohuyan Megahit NCBI (PRJNA393611: SRR5891723) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.552 399.4965839 Eurasian species VV_SRR5891726 Vitis vinifera Misket Dunavski Megahit NCBI (PRJNA393611: SRR5891726) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.542 428.5985565 Eurasian species VV_SRR5891729 Vitis vinifera Aishenmeigui Megahit NCBI (PRJNA393611: SRR5891729) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.687 474.8583765 Eurasian species VV_SRR5891733 Vitis vinifera Clone 10-1-35 Megahit NCBI (PRJNA393611: SRR5891733) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.484 403.158534 Eurasian species VV_SRR5891734 Vitis vinifera Clone 10-1-48 Megahit NCBI (PRJNA393611: SRR5891734) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.557 405.2480707 Eurasian species VV_SRR5891735 Vitis vinifera Clone 10-1-61 Megahit NCBI (PRJNA393611: SRR5891735) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.609 422.8689461 Eurasian species VV_SRR5891737 Vitis vinifera Clone 10-1-71 Megahit NCBI (PRJNA393611: SRR5891737) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.592 421.9252405 Eurasian species VV_SRR5891738 Vitis vinifera Clone 10-1-82 Megahit NCBI (PRJNA393611: SRR5891738) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.643 434.7789621 Eurasian species VV_SRR5891739 Vitis vinifera Clone 10-1-91 Megahit NCBI (PRJNA393611: SRR5891739) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.428 392.5187979 Eurasian species VV_SRR5891740 Vitis vinifera Clone 60-34 Megahit NCBI (PRJNA393611: SRR5891740) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.593 415.8405981 Eurasian species VV_SRR5891741 Vitis vinifera Clone 81-3-85 Megahit NCBI (PRJNA393611: SRR5891741) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.679 466.2731419 Eurasian species VV_SRR5891742 Vitis vinifera Neo Muscat Megahit NCBI (PRJNA393611: SRR5891742) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.668 458.6868677 Eurasian species VV_SRR5891743 Vitis vinifera Minikaiji Megahit NCBI (PRJNA393611: SRR5891743) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.444 376.0197601 Eurasian species VV_SRR5891744 Vitis vinifera Manicure Finger Megahit NCBI (PRJNA393611: SRR5891744) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.612 411.7744694 Eurasian species VV_SRR5891745 Vitis vinifera Headdress Megahit NCBI (PRJNA393611: SRR5891745) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.671 441.973176 Eurasian species VV_SRR5891746 Vitis vinifera Red Cocoon Megahit NCBI (PRJNA393611: SRR5891746) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.439 356.7515478 Eurasian species VV_SRR5891747 Vitis vinifera Oriental Star Megahit NCBI (PRJNA393611: SRR5891747) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.643 500.6036386 Eurasian species VV_SRR5891749 Vitis vinifera Unicorn Megahit NCBI (PRJNA393611: SRR5891749) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.556 430.8026266 Eurasian species VV_SRR5891753 Vitis vinifera Clone 10-1-110 Megahit NCBI (PRJNA393611: SRR5891753) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.585 423.5171766 Eurasian species VV_SRR5891754 Vitis vinifera Clone 10-1-108 Megahit NCBI (PRJNA393611: SRR5891754) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.47 395.648592 Eurasian species VV_SRR5891756 Vitis vinifera Rosario Rosso Megahit NCBI (PRJNA393611: SRR5891756) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.593 353.0574579 Eurasian species VV_SRR5891757 Vitis vinifera Mydollar Megahit NCBI (PRJNA393611: SRR5891757) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.596 455.3079023 Eurasian species VV_SRR5891769 Vitis vinifera Chasselas Rose Megahit NCBI (PRJNA393611: SRR5891769) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.628 439.0807381 Eurasian species VV_SRR5891771 Vitis vinifera Zexiang Megahit NCBI (PRJNA393611: SRR5891771) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.46 404.0270061 Eurasian species VV_SRR5891772 Vitis vinifera Zixiang Seedless Megahit NCBI (PRJNA393611: SRR5891772) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.582 494.2715902 Eurasian species VV_SRR5891773 Vitis vinifera Aligote Megahit NCBI (PRJNA393611: SRR5891773) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.511 408.512064 Eurasian species VV_SRR5891774 Vitis vinifera Cabernet Franc Megahit NCBI (PRJNA393611: SRR5891774) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.352 369.2288342 Eurasian species VV_SRR5891775 Vitis vinifera Cabernet Gernischet Megahit NCBI (PRJNA393611: SRR5891775) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.527 412.4188766 Eurasian species VV_SRR5891776 Vitis vinifera Cabernet Sauvignon Megahit NCBI (PRJNA393611: SRR5891776) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.56 428.7732458 Eurasian species VV_SRR5891778 Vitis vinifera Chardonnay Megahit NCBI (PRJNA393611: SRR5891778) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.324 350.7047787 Eurasian species VV_SRR5891782 Vitis vinifera Blush Seedless Megahit NCBI (PRJNA393611: SRR5891782) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.518 390.0708838 Eurasian species VV_SRR5891783 Vitis vinifera Blue French Megahit NCBI (PRJNA393611: SRR5891783) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.553 397.2709274 Eurasian species VV_SRR5891784 Vitis vinifera Black Rose Megahit NCBI (PRJNA393611: SRR5891784) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.565 315.2704744 Eurasian species VV_SRR5891785 Vitis vinifera Black Monukka Megahit NCBI (PRJNA393611: SRR5891785) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.689 452.8428154 Eurasian species VV_SRR5891786 Vitis vinifera Beauty Seedless Megahit NCBI (PRJNA393611: SRR5891786) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.588 409.0785723 Eurasian species VV_SRR5891787 Vitis vinifera Muscat Hamburg Megahit NCBI (PRJNA393611: SRR5891787) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.249 324.5754766 Eurasian species VV_SRR5891788 Vitis vinifera Thompson Seedless Megahit NCBI (PRJNA393611: SRR5891788) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.641 476.333951 Eurasian species VV_SRR5891791 Vitis vinifera Fenhongtaifei Megahit NCBI (PRJNA393611: SRR5891791) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.442 355.0458565 Eurasian species VV_SRR5891792 Vitis vinifera Gapandmak Megahit NCBI (PRJNA393611: SRR5891792) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.635 456.3609695 Eurasian species VV_SRR5891793 Vitis vinifera Hanazawa Rizamat Megahit NCBI (PRJNA393611: SRR5891793) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.546 404.4130716 Eurasian species VV_SRR5891794 Vitis vinifera Hanpin19 Megahit NCBI (PRJNA393611: SRR5891794) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.318 349.5400419 Eurasian species VV_SRR5891795 Vitis vinifera NA Megahit NCBI (PRJNA393611: SRR5891795) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.602 394.1745939 Eurasian species VV_SRR5891796 Vitis vinifera Delameigui Megahit NCBI (PRJNA393611: SRR5891796) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.563 397.6113214 Eurasian species VV_SRR5891803 Vitis vinifera Hanpin21 Megahit NCBI (PRJNA393611: SRR5891803) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.627 413.8074236 Eurasian species VV_SRR5891804 Vitis vinifera Harata''NO.314'' Megahit NCBI (PRJNA393611: SRR5891804) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.534 416.6648216 Eurasian species VV_SRR5891821 Vitis vinifera Heikalasi Megahit NCBI (PRJNA393611: SRR5891821) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.524 373.5672407 Eurasian species VV_SRR5891822 Vitis vinifera Guifeimeigui Megahit NCBI (PRJNA393611: SRR5891822) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.254 444.8669653 Eurasian species VV_SRR5891823 Vitis vinifera Guibao Megahit NCBI (PRJNA393611: SRR5891823) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.352 388.0112705 Eurasian species VV_SRR5891824 Vitis vinifera Fenghuang NO.51 Megahit NCBI (PRJNA393611: SRR5891824) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.572 402.4399147 Eurasian species VV_SRR5891825 Vitis vinifera Hongdalayi Megahit NCBI (PRJNA393611: SRR5891825) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.42 344.5416851 Eurasian species VV_SRR5891826 Vitis vinifera Hetianhong Megahit NCBI (PRJNA393611: SRR5891826) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.376 383.441391 Eurasian species VV_SRR5891827 Vitis vinifera Carignane Megahit NCBI (PRJNA393611: SRR5891827) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.211 313.0364876 Eurasian species VV_SRR5891828 Vitis vinifera Chasselas Rouge Megahit NCBI (PRJNA393611: SRR5891828) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.612 370.8317528 Eurasian species VV_SRR5891829 Vitis vinifera Victoria Megahit NCBI (PRJNA393611: SRR5891829) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.585 381.8891582 Eurasian species VV_SRR5891830 Vitis vinifera Muscatny Megahit NCBI (PRJNA393611: SRR5891830) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.654 433.374073 Eurasian species VV_SRR5891831 Vitis vinifera Otilia Megahit NCBI (PRJNA393611: SRR5891831) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.452 387.0316162 Eurasian species VV_SRR5891832 Vitis vinifera Tamina Megahit NCBI (PRJNA393611: SRR5891832) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.545 397.6246462 Eurasian species VV_SRR5891833 Vitis vinifera Zimeigui Megahit NCBI (PRJNA393611: SRR5891833) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.271 324.9284506 Eurasian species VV_SRR5891834 Vitis vinifera Augusta Megahit NCBI (PRJNA393611: SRR5891834) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.486 408.9855499 Eurasian species VV_SRR5891835 Vitis vinifera Zhengjia Megahit NCBI (PRJNA393611: SRR5891835) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.618 454.6707563 Eurasian species VV_SRR5891836 Vitis vinifera Zhengzhouzaohong Megahit NCBI (PRJNA393611: SRR5891836) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.591 405.518116 Eurasian species VV_SRR5891838 Vitis vinifera Clone 97-3-78 Megahit NCBI (PRJNA393611: SRR5891838) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.505 377.9376125 Eurasian species VV_SRR5891839 Vitis vinifera Clone 97-3-67 Megahit NCBI (PRJNA393611: SRR5891839) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.619 406.6595469 Eurasian species VV_SRR5891840 Vitis vinifera Clone 97-3-60 Megahit NCBI (PRJNA393611: SRR5891840) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.625 414.4146242 Eurasian species VV_SRR5891841 Vitis vinifera Clone 97-3-57 Megahit NCBI (PRJNA393611: SRR5891841) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.583 409.1815386 Eurasian species VV_SRR5891842 Vitis vinifera Clone 97-3-45 Megahit NCBI (PRJNA393611: SRR5891842) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.57 400.7418537 Eurasian species VV_SRR5891843 Vitis vinifera Clone 97-3-38 Megahit NCBI (PRJNA393611: SRR5891843) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.632 422.3119822 Eurasian species VV_SRR5891844 Vitis vinifera Clone 97-3-37 Megahit NCBI (PRJNA393611: SRR5891844) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.604 408.0125799 Eurasian species VV_SRR5891845 Vitis vinifera Clone 97-3-34 Megahit NCBI (PRJNA393611: SRR5891845) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.649 422.2907944 Eurasian species VV_SRR5891846 Vitis vinifera Clone 97-3-32 Megahit NCBI (PRJNA393611: SRR5891846) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.639 427.3815432 Eurasian species VV_SRR5891847 Vitis vinifera Clone 96-5 Megahit NCBI (PRJNA393611: SRR5891847) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.479 388.0292578 Eurasian species VV_SRR5891848 Vitis vinifera Jingzijing Megahit NCBI (PRJNA393611: SRR5891848) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.373 342.9525356 Eurasian species VV_SRR5891850 Vitis vinifera Hiro Hamburg Megahit NCBI (PRJNA393611: SRR5891850) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.571 406.6309328 Eurasian species VV_SRR5891853 Vitis vinifera High Bailey Megahit NCBI (PRJNA393611: SRR5891853) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.636 440.573802 Eurasian species VV_SRR5891854 Vitis vinifera Black Ballade Megahit NCBI (PRJNA393611: SRR5891854) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.412 397.0859203 Eurasian species VV_SRR5891855 Vitis vinifera Cabernet Suntory Megahit NCBI (PRJNA393611: SRR5891855) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.528 431.1775637 Eurasian species VV_SRR5891856 Vitis vinifera Pirato Megahit NCBI (PRJNA393611: SRR5891856) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.506 387.6234751 Eurasian species VV_SRR5891859 Vitis vinifera Rkatsiteli Megahit NCBI (PRJNA393611: SRR5891859) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.576 405.2554855 Eurasian species VV_SRR5891860 Vitis vinifera Rkatsiteli vardisperi Megahit NCBI (PRJNA393611: SRR5891860) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.655 431.2453604 Eurasian species VV_SRR5891862 Vitis vinifera Mzwane Megahit NCBI (PRJNA393611: SRR5891862) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.708 553.8688345 Eurasian species VV_SRR5891863 Vitis vinifera Syrah Megahit NCBI (PRJNA393611: SRR5891863) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.508 387.9394312 Eurasian species VV_SRR5891866 Vitis vinifera Semillon Megahit NCBI (PRJNA393611: SRR5891866) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.49 390.0005541 Eurasian species VV_SRR5891868 Vitis vinifera Kerner Megahit NCBI (PRJNA393611: SRR5891868) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.208 321.1525307 Eurasian species VV_SRR5891869 Vitis vinifera Regent Megahit NCBI (PRJNA393611: SRR5891869) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.549 443.1357059 Eurasian species VV_SRR5891884 Vitis vinifera Riesling Italian Megahit NCBI (PRJNA393611: SRR5891884) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.668 436.3168659 Eurasian species VV_SRR5891885 Vitis vinifera Ribier Noir Megahit NCBI (PRJNA393611: SRR5891885) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.677 441.7449322 Eurasian species VV_SRR5891886 Vitis vinifera Pinot Noir Megahit NCBI (PRJNA393611: SRR5891886) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.416 360.6631041 Eurasian species VV_SRR5891887 Vitis vinifera Pinot Gris Megahit NCBI (PRJNA393611: SRR5891887) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.507 391.626502 Eurasian species VV_SRR5891888 Vitis vinifera Pinot Blanc Megahit NCBI (PRJNA393611: SRR5891888) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.704 491.2069702 Eurasian species VV_SRR5891890 Vitis vinifera Merlot Megahit NCBI (PRJNA393611: SRR5891890) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.445 362.6448488 Eurasian species VV_SRR5891893 Vitis vinifera Sauvignon Blanc Megahit NCBI (PRJNA393611: SRR5891893) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.368 364.2719917 Eurasian species VV_SRR5891895 Vitis vinifera Pobeda Megahit NCBI (PRJNA393611: SRR5891895) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.648 383.406024 Eurasian species VV_SRR5891896 Vitis vinifera Rizamat Megahit NCBI (PRJNA393611: SRR5891896) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.243 319.4030447 Eurasian species VV_SRR5891897 Vitis vinifera Chasselas Blanc Megahit NCBI (PRJNA393611: SRR5891897) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.544 422.3799686 Eurasian species VV_SRR5891898 Vitis vinifera Uva Sacra Megahit NCBI (PRJNA393611: SRR5891898) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.481 388.8415251 Eurasian species VV_SRR5891899 Vitis vinifera Volga Don Megahit NCBI (PRJNA393611: SRR5891899) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.678 439.3024035 Eurasian species VV_SRR5891900 Vitis vinifera Panonia Megahit NCBI (PRJNA393611: SRR5891900) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.278 319.374485 Eurasian species VV_SRR5891905 Vitis vinifera Meisibisan Megahit NCBI (PRJNA393611: SRR5891905) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.705 478.0157719 Eurasian species VV_SRR5891906 Vitis vinifera Meiguizi Megahit NCBI (PRJNA393611: SRR5891906) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.418 355.0161629 Eurasian species VV_SRR5891907 Vitis vinifera Kokuho NO.2 Megahit NCBI (PRJNA393611: SRR5891907) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.39 358.0483894 Eurasian species VV_SRR5891908 Vitis vinifera Jingyan (4N) Megahit NCBI (PRJNA393611: SRR5891908) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.587 406.2937517 Eurasian species VV_SRR5891933 Vitis vinifera Neomat Megahit NCBI (PRJNA393611: SRR5891933) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.565 409.9899616 Eurasian species VV_SRR5891954 Vitis vinifera Zaoyu Megahit NCBI (PRJNA393611: SRR5891954) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.621 435.0045652 Eurasian species VV_SRR5891955 Vitis vinifera Yunikonkaiji Megahit NCBI (PRJNA393611: SRR5891955) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.6 405.0605373 Eurasian species VV_SRR5891956 Vitis vinifera Wuhebaijixin Seedless Megahit NCBI (PRJNA393611: SRR5891956) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.384 383.2568512 Eurasian species VV_SRR5891958 Vitis vinifera Yaniu Megahit NCBI (PRJNA393611: SRR5891958) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.664 461.846693 Eurasian species VV_SRR5891959 Vitis vinifera Xiaogongzi Megahit NCBI (PRJNA393611: SRR5891959) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.368 388.2359238 Eurasian species VV_SRR5891961 Vitis vinifera Ugni Blanc Megahit NCBI (PRJNA393611: SRR5891961) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.602 437.9949331 Eurasian species VV_SRR5891962 Vitis vinifera NA Megahit NCBI (PRJNA393611: SRR5891962) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.639 408.8505106 Eurasian species VV_SRR5891963 Vitis vinifera NA Megahit NCBI (PRJNA393611: SRR5891963) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.653 488.3770399 Eurasian species VV_SRR5891964 Vitis vinifera Ballade Megahit NCBI (PRJNA393611: SRR5891964) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.666 456.1966429 Eurasian species VV_SRR5891965 Vitis vinifera Banana Megahit NCBI (PRJNA393611: SRR5891965) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.434 398.1742582 Eurasian species VV_SRR5891966 Vitis vinifera Clone 97-4-40 Megahit NCBI (PRJNA393611: SRR5891966) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.678 415.4441023 Eurasian species VV_SRR5891967 Vitis vinifera Clone 97-4-42 Megahit NCBI (PRJNA393611: SRR5891967) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.606 456.9077168 Eurasian species VV_SRR5891968 Vitis vinifera Clone 97-3-81 Megahit NCBI (PRJNA393611: SRR5891968) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.498 379.7387657 Eurasian species VV_SRR5891969 Vitis vinifera Clone 97-4 Megahit NCBI (PRJNA393611: SRR5891969) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.645 421.1140718 Eurasian species VV_SRR5891970 Vitis vinifera Clone 97-4-52 (4N) Megahit NCBI (PRJNA393611: SRR5891970) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.53 440.4198446 Eurasian species VV_SRR5891971 Vitis vinifera Alissa Megahit NCBI (PRJNA393611: SRR5891971) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.65 431.9321623 Eurasian species VV_SRR5891972 Vitis vinifera Clone 97-4-52 Megahit NCBI (PRJNA393611: SRR5891972) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.513 388.4891691 Eurasian species VV_SRR5891973 Vitis vinifera Clone 97-4-52 Megahit NCBI (PRJNA393611: SRR5891973) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.59 396.2493343 Eurasian species VV_SRR5891975 Vitis vinifera Baby finger Megahit NCBI (PRJNA393611: SRR5891975) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.54 403.8929577 Eurasian species VV_SRR5891976 Vitis vinifera Beni Pizzutello Megahit NCBI (PRJNA393611: SRR5891976) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.351 411.9421234 Eurasian species VV_SRR5891978 Vitis vinifera Pizzutello Megahit NCBI (PRJNA393611: SRR5891978) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.567 419.9504948 Eurasian species VV_SRR5891979 Vitis vinifera Italia Megahit NCBI (PRJNA393611: SRR5891979) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.661 447.189229 Eurasian species VV_SRR5891980 Vitis vinifera Schiava grossa Megahit NCBI (PRJNA393611: SRR5891980) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.269 278.7458897 Eurasian species VV_SRR5891981 Vitis vinifera Sangiovese Megahit NCBI (PRJNA393611: SRR5891981) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.47 401.939333 Eurasian species VV_SRR5891982 Vitis vinifera Benibato Megahit NCBI (PRJNA393611: SRR5891982) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.39 406.961421 Eurasian species VV_SRR5891983 Vitis vinifera Benibarado Megahit NCBI (PRJNA393611: SRR5891983) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.599 417.1773205 Eurasian species VV_SRR5891985 Vitis vinifera Muscat of Alexandria Megahit NCBI (PRJNA393611: SRR5891985) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.539 399.670475 Eurasian species VV_SRR5891986 Vitis vinifera Harslevelu Megahit NCBI (PRJNA393611: SRR5891986) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.572 507.8548288 Eurasian species VV_SRR5891987 Vitis vinifera Gloria Hungariae Megahit NCBI (PRJNA393611: SRR5891987) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.174 303.4519978 Eurasian species VV_SRR5891989 Vitis vinifera Riesling Megahit NCBI (PRJNA393611: SRR5891989) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.663 442.085701 Eurasian species VV_SRR5891990 Vitis vinifera Muscat Blanc a Petits Grains Megahit NCBI (PRJNA393611: SRR5891990) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.503 418.9314632 Eurasian species VV_SRR5891991 Vitis vinifera Flame Muscat Megahit NCBI (PRJNA393611: SRR5891991) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.458 381.9932261 Eurasian species VV_SRR5891992 Vitis vinifera Barbera Nera Megahit NCBI (PRJNA393611: SRR5891992) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.678 476.1009426 Eurasian species VV_SRR5891993 Vitis vinifera Queen of Vineyard Megahit NCBI (PRJNA393611: SRR5891993) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.393 361.6233482 Eurasian species VV_SRR5891996 Vitis vinifera Clone 97-4-30 Megahit NCBI (PRJNA393611: SRR5891996) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.603 386.6189013 Eurasian species VV_SRR5891998 Vitis vinifera Clone 97-4-25 Megahit NCBI (PRJNA393611: SRR5891998) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.545 398.4025593 Eurasian species VV_SRR5891999 Vitis vinifera Clone 97-4-29 Megahit NCBI (PRJNA393611: SRR5891999) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.644 415.9704094 Eurasian species VV_SRR5892000 Vitis vinifera Clone 97-4-19 Megahit NCBI (PRJNA393611: SRR5892000) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.7 445.9869776 Eurasian species VV_SRR5892001 Vitis vinifera Clone 97-4-21 Megahit NCBI (PRJNA393611: SRR5892001) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.538 419.3532734 Eurasian species VV_SRR5892002 Vitis vinifera Clone 97-4-13 Megahit NCBI (PRJNA393611: SRR5892002) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.7 469.2433376 Eurasian species VV_SRR5892003 Vitis vinifera Clone 97-4-17 Megahit NCBI (PRJNA393611: SRR5892003) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.68 430.2766056 Eurasian species VV_SRR5892004 Vitis vinifera Shafu seedless Megahit NCBI (PRJNA393611: SRR5892004) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.538 443.2029619 Eurasian species VV_SRR5892006 Vitis vinifera Shohei Red Megahit NCBI (PRJNA393611: SRR5892006) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.639 446.6570082 Eurasian species VV_SRR5892007 Vitis vinifera Sugraone (4N) Megahit NCBI (PRJNA393611: SRR5892007) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.698 464.3603239 Eurasian species VV_SRR5892009 Vitis vinifera Rosaki Megahit NCBI (PRJNA393611: SRR5892009) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.631 383.1205912 Eurasian species VV_SRR5892011 Vitis vinifera Sanidoruchu Megahit NCBI (PRJNA393611: SRR5892011) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.303 298.2362442 Eurasian species VV_SRR5892026 Vitis vinifera Jingcui Megahit NCBI (PRJNA393611: SRR5892026) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.498 419.8615961 Eurasian species VV_SRR5892027 Vitis vinifera Jingdajing Megahit NCBI (PRJNA393611: SRR5892027) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.578 397.3483095 Eurasian species VV_SRR5892028 Vitis vinifera Hongjixin Megahit NCBI (PRJNA393611: SRR5892028) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.455 397.5680809 Eurasian species VV_SRR5892030 Vitis vinifera Jingmi Megahit NCBI (PRJNA393611: SRR5892030) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.386 350.6635752 Eurasian species VV_SRR5892031 Vitis vinifera Jingxiangyu Megahit NCBI (PRJNA393611: SRR5892031) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.321 358.0753317 Eurasian species VV_SRR5892032 Vitis vinifera Jingfeng Megahit NCBI (PRJNA393611: SRR5892032) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.65 425.8634129 Eurasian species VV_SRR5892033 Vitis vinifera Jingkejing Megahit NCBI (PRJNA393611: SRR5892033) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.291 334.321084 Eurasian species VV_SRR5892036 Vitis vinifera Jingxiu Megahit NCBI (PRJNA393611: SRR5892036) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.37 358.8921328 Eurasian species VV_SRR5892038 Vitis vinifera Tianshanputao Megahit NCBI (PRJNA393611: SRR5892038) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.648 429.7710543 Eurasian species VV_SRR5892045 Vitis vinifera Red Globe Megahit NCBI (PRJNA393611: SRR5892045) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.572 416.4658089 Eurasian species VV_SRR5892046 Vitis vinifera Sugraone Megahit NCBI (PRJNA393611: SRR5892046) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.115 273.7511978 Eurasian species VV_SRR5892047 Vitis vinifera Ruby Seedless Megahit NCBI (PRJNA393611: SRR5892047) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.534 414.9076853 Eurasian species VV_SRR5892050 Vitis vinifera Chasselas Blanc Megahit NCBI (PRJNA393611: SRR5892050) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.209 339.5865545 Eurasian species VV_SRR5892054 Vitis vinifera Topaz Megahit NCBI (PRJNA393611: SRR5892054) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.652 437.2876482 Eurasian species VV_SRR5892055 Vitis vinifera Yunibarasebun Megahit NCBI (PRJNA393611: SRR5892055) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.699 500.975276 Eurasian species VV_SRR5892056 Vitis vinifera Regina Megahit NCBI (PRJNA393611: SRR5892056) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.682 454.4858208 Eurasian species VV_SRR5892057 Vitis vinifera Bolgar Megahit NCBI (PRJNA393611: SRR5892057) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.59 415.0762024 Eurasian species VV_SRR5892058 Vitis vinifera Maiskii Chernyi Megahit NCBI (PRJNA393611: SRR5892058) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.627 423.7167358 Eurasian species VV_SRR5892059 Vitis vinifera Kabassia Megahit NCBI (PRJNA393611: SRR5892059) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.592 418.005662 Eurasian species VV_SRR5892061 Vitis vinifera Moldova Megahit NCBI (PRJNA393611: SRR5892061) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.559 472.6277771 Eurasian species VV_SRR5892062 Vitis vinifera Riesling Forte Megahit NCBI (PRJNA393611: SRR5892062) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.256 335.608717 Eurasian species VV_SRR5892063 Vitis vinifera Clone 10-1-62 Megahit NCBI (PRJNA393611: SRR5892063) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.422 385.2242231 Eurasian species VV_SRR5892067 Vitis vinifera Clone 10-1-104 Megahit NCBI (PRJNA393611: SRR5892067) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.574 429.40277 Eurasian species VV_SRR5892068 Vitis vinifera Clone 10-1-100 Megahit NCBI (PRJNA393611: SRR5892068) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.369 373.4013395 Eurasian species VV_SRR5892070 Vitis vinifera Yuelianhua Megahit NCBI (PRJNA393611: SRR5892070) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.407 345.9879646 Eurasian species VV_SRR6156309 Vitis vinifera Moscato Bianco Megahit NCBI (PRJNA373967: SRR6156309) Illumina HiSeq 2000 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.665 416.852314 Eurasian species VV_SRR6156314 Vitis vinifera Passerina Megahit NCBI (PRJNA373967: SRR6156314) Illumina HiSeq 2500 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.585 342.990324 Eurasian species VV_SRR6156334 Vitis vinifera Negro Amaro Megahit NCBI (PRJNA373967: SRR6156334, SRR6156337) Illumina HiSeq 2500;Illumina HiSeq 2000 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.591 369.2556372 Eurasian species VV_SRR6156340 Vitis vinifera Barbera Nera Megahit NCBI (PRJNA373967: SRR6156340, SRR6156341, SRR6156342, SRR6156343) Illumina HiSeq 2000;Illumina HiSeq 2000;Illumina HiSeq 2500;Illumina HiSeq 2500 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.68 453.738534 Eurasian species VV_SRR6156354 Vitis vinifera Zinfandel Megahit NCBI (PRJNA373967: SRR6156354) Illumina HiSeq 2000 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.632 338.3794584 Eurasian species VV_SRR6156356 Vitis vinifera Refosco dal Peduncolo Rosso Megahit NCBI (PRJNA373967: SRR6156356) Illumina HiSeq 2000 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.653 409.6634016 Eurasian species VV_SRR6156401 Vitis vinifera Garganega Megahit NCBI (PRJNA373967: SRR6156401) Illumina HiSeq 2000 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.661 383.8531427 Eurasian species VV_SRR6156402 Vitis vinifera Glera Megahit NCBI (PRJNA373967: SRR6156402) Illumina HiSeq 2000 PAIRED Magris G, Di Gaspero G, Marroni F, et al. Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties[J]. The Plant Journal, 2019, 99(5): 895-909. 0.655 415.3700647 Eurasian species VV_SRR7662542 Vitis vinifera Thompson seedless Megahit NCBI (PRJNA485199: SRR7662542) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.697 487.875248 Eurasian species VV_SRR7662543 Vitis vinifera Tammara Megahit NCBI (PRJNA485199: SRR7662543) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.65 551.0561008 Eurasian species VV_SRR7662545 Vitis vinifera Tano Red Megahit NCBI (PRJNA485199: SRR7662545) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.616 562.3643045 Eurasian species VV_SRR7662546 Vitis vinifera Himord Megahit NCBI (PRJNA485199: SRR7662546) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.598 594.8819323 Eurasian species VV_SRR7662547 Vitis vinifera Hongju Megahit NCBI (PRJNA485199: SRR7662547) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.696 475.751545 Eurasian species VV_SRR7662548 Vitis vinifera Cheongsoo Megahit NCBI (PRJNA485199: SRR7662548) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.617 572.7603941 Eurasian species VV_SRR7662549 Vitis vinifera Crimson Seedless Megahit NCBI (PRJNA485199: SRR7662549) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.706 486.8488646 Eurasian species VV_SRR7662550 Vitis vinifera Dawn Seedless Megahit NCBI (PRJNA485199: SRR7662550) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.713 479.175642 Eurasian species VV_SRR7662551 Vitis vinifera Fantasy Seedless Megahit NCBI (PRJNA485199: SRR7662551) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.728 463.2838221 Eurasian species VV_SRR7662552 Vitis vinifera Autumn Royal Megahit NCBI (PRJNA485199: SRR7662552) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.715 463.8297186 Eurasian species VV_SRR7662553 Vitis vinifera Autumn Seedless Megahit NCBI (PRJNA485199: SRR7662553) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.717 475.407443 Eurasian species VV_SRR7662554 Vitis vinifera Bailey Alicante Megahit NCBI (PRJNA485199: SRR7662554) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.639 574.4911957 Eurasian species VV_SRR7662555 Vitis vinifera Campbell Early Megahit NCBI (PRJNA485199: SRR7662555) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.647 543.4457226 Eurasian species VV_SRR7662556 Vitis vinifera Shiny Star Megahit NCBI (PRJNA485199: SRR7662556) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.646 544.1654005 Eurasian species VV_SRR7662557 Vitis vinifera Suffolk Red Megahit NCBI (PRJNA485199: SRR7662557) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.604 566.0291843 Eurasian species VV_SRR7662558 Vitis vinifera Italia Megahit NCBI (PRJNA485199: SRR7662558) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.689 489.9541702 Eurasian species VV_SRR7662559 Vitis vinifera Kishmish Chernyi Megahit NCBI (PRJNA485199: SRR7662559) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.709 488.3348217 Eurasian species VV_SRR7662560 Vitis vinifera Muscat of Alexandria Megahit NCBI (PRJNA485199: SRR7662560) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.711 506.6944199 Eurasian species VV_SRR7662561 Vitis vinifera Perlon Megahit NCBI (PRJNA485199: SRR7662561) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.675 488.7390738 Eurasian species VV_SRR7662562 Vitis vinifera Princess Megahit NCBI (PRJNA485199: SRR7662562) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.706 470.6534986 Eurasian species VV_SRR7662564 Vitis vinifera Hur Seedless Megahit NCBI (PRJNA485199: SRR7662564) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.692 480.4581738 Eurasian species VV_SRR7662565 Vitis vinifera Ruby Seedless Megahit NCBI (PRJNA485199: SRR7662565) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.693 486.8405848 Eurasian species VV_SRR769818 Vitis vinifera Jingxiangyu Megahit NCBI (PRJNA192798: SRR769818) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.059 107.2669601 Eurasian species VV_SRR769819 Vitis vinifera Jingzaojing Megahit NCBI (PRJNA192798: SRR769819) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.015 41.70967579 Eurasian species VV_SRR769820 Vitis vinifera Jingxiu Megahit NCBI (PRJNA192798: SRR769820) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0 5.304033279 Eurasian species VV_SRR769821 Vitis vinifera Xiangfei Megahit NCBI (PRJNA192798: SRR769821) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0 5.057776451 Eurasian species VV_SRR769822 Vitis vinifera Muscat Hamburg Megahit NCBI (PRJNA192798: SRR769822) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0 5.133540154 Eurasian species VV_SRR769823 Vitis vinifera Muscat of Alexandria Megahit NCBI (PRJNA192798: SRR769823) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0 5.775050163 Eurasian species VV_SRR769824 Vitis vinifera Italia Megahit NCBI (PRJNA192798: SRR769824) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 6.821512222 Eurasian species VV_SRR769825 Vitis vinifera Thompson Seedless Megahit NCBI (PRJNA192798: SRR769825) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 7.662007332 Eurasian species VV_SRR769826 Vitis vinifera Jingzijing Megahit NCBI (PRJNA192798: SRR769826) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 6.592790604 Eurasian species VV_SRR769827 Vitis vinifera Zhengguodawuhe Megahit NCBI (PRJNA192798: SRR769827) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 5.941922188 Eurasian species VV_SRR769828 Vitis vinifera Ruby Seedless Megahit NCBI (PRJNA192798: SRR769828) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 4.474793434 Eurasian species VV_SRR769829 Vitis vinifera Red globe Megahit NCBI (PRJNA192798: SRR769829) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 4.652147293 Eurasian species VV_SRR769830 Vitis vinifera Beauty Seedless Megahit NCBI (PRJNA192798: SRR769830) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0 5.588412285 Eurasian species VV_SRR769831 Vitis vinifera Manicure Finger Megahit NCBI (PRJNA192798: SRR769831) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0 5.794131279 Eurasian species VV_SRR8618111 Vitis vinifera Rizamat Megahit NCBI (PRJNA485199: SRR8618111) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.7 506.7299385 Eurasian species VV_SRR8618112 Vitis vinifera Red Globe Megahit NCBI (PRJNA485199: SRR8618112) Illumina HiSeq 4000 PAIRED Kim M S, Hur Y Y, Kim J H, et al. Genome resequencing, improvement of variant calling, and population genomic analyses provide insights into the seedlessness in the genus vitis[J]. G3: Genes, Genomes, Genetics, 2020, 10(9): 3365-3377. 0.717 485.8931303 Eurasian species VV_SRR863595 Vitis vinifera Tannat Megahit NCBI (PRJNA203534: SRR863595, SRR863618) Illumina HiSeq 1000 PAIRED Da Silva C, Zamperin G, Ferrarini A, et al. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome[J]. The Plant Cell, 2013, 25(12): 4777-4788. 0.683 484.1460838 North American species NA_GCA_022059055.1 Vitis cinerea B9 GCA_022059055.1_B9 NCBI (PRJNA281110) The assembled contigs was directly cited. NA Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.872 464.0583162 Eurasian species VV_SRR8835140 Vitis vinifera Tsolikoouri Megahit NCBI (PRJNA450929: SRR8835140) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.476 275.5624285 Eurasian species VV_SRR8835147 Vitis vinifera Jaen Megahit NCBI (PRJNA450929: SRR8835147) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.599 328.2614145 Eurasian species VV_SRR8835148 Vitis vinifera Heben Megahit NCBI (PRJNA450929: SRR8835148) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.642 378.4370422 Eurasian species VV_SRR8835150 Vitis vinifera Espadeiro Tinto Megahit NCBI (PRJNA450929: SRR8835150) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.557 312.6064806 Eurasian species VV_SRR8835152 Vitis vinifera Colorino Megahit NCBI (PRJNA450929: SRR8835152) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.523 315.5295696 Eurasian species VV_SRR8835156 Vitis vinifera Savagnin Megahit NCBI (PRJNA450929: SRR8835156) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.555 322.5114689 Eurasian species VV_SRR8835158 Vitis vinifera Medouar Megahit NCBI (PRJNA450929: SRR8835158) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.544 298.9798832 Eurasian species VV_SRR8835159 Vitis vinifera Orlovi nogti Megahit NCBI (PRJNA450929: SRR8835159) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.452 277.9727869 Eurasian species VV_SRR8835160 Vitis vinifera Malvasia di Sardegna Megahit NCBI (PRJNA450929: SRR8835160) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.465 331.5116053 Eurasian species VV_SRR8835161 Vitis vinifera Maska Megahit NCBI (PRJNA450929: SRR8835161) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.542 318.532032 Eurasian species VV_SRR8835163 Vitis vinifera Listan Prieto Megahit NCBI (PRJNA450929: SRR8835163) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.563 322.5080585 Eurasian species VV_SRR8835166 Vitis vinifera Sultanine (Sultanina) Megahit NCBI (PRJNA450929: SRR8835166) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.614 349.9964676 Eurasian species VV_SRR8835169 Vitis vinifera Chouchillon Megahit NCBI (PRJNA450929: SRR8835169) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.657 353.9221544 Eurasian species VV_SRR8835171 Vitis vinifera Cabernet Franc Megahit NCBI (PRJNA450929: SRR8835171) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.594 327.359231 Eurasian species VV_SRR8835172 Vitis vinifera Araklinos Megahit NCBI (PRJNA450929: SRR8835172) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.624 329.9151917 Eurasian species VV_SRR8835173 Vitis vinifera Castellana Blanca Megahit NCBI (PRJNA450929: SRR8835173) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.657 374.6520758 Vitis rotundifolia RO_GCA_022557335.1 Vitis rotundifolia Noble GCA_022557335.1_ASM2255733v1 NCBI (PRJNA738474) The assembled contigs was directly cited. NA Park M, Vera D, Kambrianda D, et al. Chromosome-level genome sequence assembly and genome-wide association study of Muscadinia rotundifolia reveal the genetics of 12 berry-related traits[J]. Horticulture research, 2022, 9. 0.857 375.3632927 Eurasian species VV_SRR8835174 Vitis vinifera Carignan Noir Megahit NCBI (PRJNA450929: SRR8835174) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.435 289.9379272 Eurasian species VV_SRR9301863 Vitis vinifera Bianca UD-21076 Megahit NCBI (PRJNA546224: SRR9301863, SRR9301864, SRR9301865, SRR9301866, SRR9301867) Illumina HiSeq 2000;Illumina MiSeq;Illumina MiSeq;Illumina HiSeq 2000;Illumina HiSeq 2500 PAIRED Foria S, Copetti D, Eisenmann B, et al. Gene duplication and transposition of mobile elements drive evolution of the Rpv3 resistance locus in grapevine[J]. The Plant Journal, 2020, 101(3): 529-542. 0.607 529.7658215 Inter-species UN_SRR8699312 Vitis (Undefined) Vitis hybrid cultivar Horizon Megahit NCBI (PRJNA281110: SRR8699312) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.496 411.1567612 Inter-species UN_SRR8699313 Vitis (Undefined) Vitis hybrid cultivar " illinois 547-1" Megahit NCBI (PRJNA281110: SRR8699313) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.307 360.1838694 Inter-species UN_SRR8699317 Vitis (Undefined) Vitis hybrid cultivar " MN1264" Megahit NCBI (PRJNA281110: SRR8699317) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.636 556.1478786 Inter-species UN_SRR8699318 Vitis (Undefined) Vitis hybrid cultivar MN1246 Megahit NCBI (PRJNA281110: SRR8699318) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.641 548.4642744 Inter-species IS_SRR5892005 Vitis amurensis × Vitis riparia Shanhe4 Megahit NCBI (PRJNA393611: SRR5892005) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.22 341.7697201 Inter-species IS_SRR769833 Vitis amurensis × Vitis riparia Shanheerhao Megahit NCBI (PRJNA192798: SRR769833) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 4.422000885 Inter-species IS_SRR5483433 Vitis amurensis × Vitis vinifera Zuoyouhong Megahit NCBI (PRJNA384014: SRR5483433) Illumina HiSeq 2000 PAIRED Yin L, Qu J, Deng S, et al. Phytohormone and genome variations in Vitis amurensis resistant to downy mildew[J]. Genome, 2017, 60(10): 791-796. 0.271 211.8253298 North American species NA_GCA_900538005.1 Vitis riparia × Vitis cinerea Börner GCA_900538005.1_BoeWGS1.0_2019 NCBI (PRJEB28084) The assembled contigs was directly cited. NA Holtgräwe D, Rosleff Soerensen T, Hausmann L, et al. A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock ‘Börner’(Vitis riparia× Vitis cinerea) and Its Exploitation for Marker Development and Targeted Mapping[J]. Frontiers in plant science, 2020, 11: 156. 0.424 586.6341591 Inter-species IS_SRR5891798 Vitis labrusca (Vitis labrusca × Vitis vinifera) Concord Grape\, Fox Grape Megahit NCBI (PRJNA393611: SRR5891798) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.174 340.2268476 sylvestris SY_GCA_903992495.4 Vitis vinifera subsp. sylvestris NA GCA_903992495.4_Sylvestris_C1-2_haplotigs_pseudomolecules NCBI (PRJEB37020) The assembled contigs was directly cited. NA Badouin H, Velt A, Gindraud F, et al. The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication[J]. Genome biology, 2020, 21(1): 1-24. 0.591 302.5642376 Inter-species IS_SRR5891917 Vitis labrusca (Vitis labrusca × Vitis vinifera) Concord Grape\, Fox Grape Megahit NCBI (PRJNA393611: SRR5891917) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.293 347.0020037 Eurasian species VV_GCF_000003745.3 Vitis vinifera PN40024 (Reference genome) GCF_000003745.3_12X NCBI (PRJEA18785) The assembled contigs was directly cited. NA Jaillon O, Aury J M, Noel B, et al. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla[J]. nature, 2007, 449(7161): 463-7. 0.898 463.9200468 Inter-species IS_SRR8835151 Vitis labrusca (Vitis labrusca × Vitis vinifera) Concord Megahit NCBI (PRJNA450929: SRR8835151) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.625 394.9758568 North American species NA_GCF_004353265.1 Vitis riparia Riparia Gloire de Montpellier GCF_004353265.1_EGFV_Vit.rip_1.0 NCBI (PRJNA512170) The assembled contigs was directly cited. NA Girollet N, Rubio B, Lopez-Roques C, et al. De novo phased assembly of the Vitis riparia grape genome[J]. Scientific data, 2019, 6(1): 1-8. 0.976 471.3427067 Inter-species IS_SRR5891797 Vitis lincecoumii × Vitis vinifera E.S9-2-74 Megahit NCBI (PRJNA393611: SRR5891797) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.502 421.4195948 Inter-species IS_SRR5891918 Vitis lincecoumii × Vitis vinifera ES-7-11-49 Megahit NCBI (PRJNA393611: SRR5891918) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.592 534.4178734 Inter-species IS_SRR5892029 Vitis pseudoreticulata × Vitis vinifera Huajia No.8 Megahit NCBI (PRJNA393611: SRR5892029) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.296 411.0378065 Inter-species IS_SRR5891770 Vitis rupestris × Vitis lincecumii × Vitis vinifera Couderc Megahit NCBI (PRJNA393611: SRR5891770) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.627 436.9581842 Inter-species IS_SRR5891865 Vitis rupestris × Vitis lincecumii × Vitis vinifera Seibel 5437 Megahit NCBI (PRJNA393611: SRR5891865) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.392 402.4965105 Inter-species IS_SRR5891892 Vitis rupestris × Vitis lincecumii × Vitis vinifera Seibel 4646 Megahit NCBI (PRJNA393611: SRR5891892) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.501 431.0053596 Inter-species IS_SRR5891725 Vitis thunbergii × Vitis vinifera Beifeng Megahit NCBI (PRJNA393611: SRR5891725) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.559 480.0229139 Inter-species IS_SRR5891817 Vitis thunbergii × Vitis vinifera Beizi Megahit NCBI (PRJNA393611: SRR5891817) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.516 420.3798647 Inter-species IS_SRR5891819 Vitis thunbergii × Vitis vinifera Beixiang Megahit NCBI (PRJNA393611: SRR5891819) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.416 389.1867657 Inter-species IS_SRR5891631 Vitis vinifera × Unknown Taylorrebe Megahit NCBI (PRJNA393611: SRR5891631) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.476 413.8669662 Inter-species IS_SRR5891637 Vitis vinifera × Vitis amurensis Beimei 4N Megahit NCBI (PRJNA393611: SRR5891637) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.369 360.3888893 Inter-species IS_SRR5891638 Vitis vinifera × Vitis amurensis Beihong 4N Megahit NCBI (PRJNA393611: SRR5891638) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.095 253.6182985 Inter-species IS_SRR5891724 Vitis vinifera × Vitis amurensis Beichun Megahit NCBI (PRJNA393611: SRR5891724) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.216 342.1510029 Inter-species IS_SRR5891730 Vitis vinifera × Vitis amurensis Beihong Megahit NCBI (PRJNA393611: SRR5891730) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.361 374.9796772 Inter-species IS_SRR5891731 Vitis vinifera × Vitis amurensis Beimei Megahit NCBI (PRJNA393611: SRR5891731) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.323 367.0991087 Inter-species IS_SRR5891748 Vitis vinifera × Vitis amurensis New Beichun Megahit NCBI (PRJNA393611: SRR5891748) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.357 363.7868986 Inter-species IS_SRR5891818 Vitis vinifera × Vitis amurensis Beixin Megahit NCBI (PRJNA393611: SRR5891818) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.482 407.8373251 Inter-species IS_SRR5891820 Vitis vinifera × Vitis amurensis Beiquan Megahit NCBI (PRJNA393611: SRR5891820) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.462 368.9459658 Inter-species IS_SRR5891807 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-422 Megahit NCBI (PRJNA393611: SRR5891807) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.53 480.5351076 Inter-species IS_SRR5891921 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-633 Megahit NCBI (PRJNA393611: SRR5891921) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.486 487.0272083 Inter-species IS_SRR5892065 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-99 Megahit NCBI (PRJNA393611: SRR5892065) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.582 564.7492342 Inter-species IS_SRR5892069 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-70 Megahit NCBI (PRJNA393611: SRR5892069) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.615 536.8163824 Inter-species IS_SRR5891666 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-286 Megahit NCBI (PRJNA393611: SRR5891666) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.595 472.5168343 Inter-species IS_SRR5891667 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-296 Megahit NCBI (PRJNA393611: SRR5891667) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.452 444.6615925 Inter-species IS_SRR5891668 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891668) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.561 478.0194817 Inter-species IS_SRR5891669 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-239 Megahit NCBI (PRJNA393611: SRR5891669) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.573 470.5247059 Inter-species IS_SRR5891670 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-273 Megahit NCBI (PRJNA393611: SRR5891670) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.558 462.2276649 Inter-species IS_SRR5891671 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-275 Megahit NCBI (PRJNA393611: SRR5891671) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.387 408.0592918 Inter-species IS_SRR5891672 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-123 Megahit NCBI (PRJNA393611: SRR5891672) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.584 455.1885309 Inter-species IS_SRR5891673 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891673) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.544 480.9799089 Inter-species IS_SRR5891674 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-203 Megahit NCBI (PRJNA393611: SRR5891674) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.467 435.1905394 Inter-species IS_SRR5891675 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-213 Megahit NCBI (PRJNA393611: SRR5891675) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.601 536.6043453 Inter-species IS_SRR5891750 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-697 Megahit NCBI (PRJNA393611: SRR5891750) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.583 436.8524313 Inter-species IS_SRR5891808 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-420 Megahit NCBI (PRJNA393611: SRR5891808) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.476 412.3403158 Inter-species IS_SRR5891809 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-323 Megahit NCBI (PRJNA393611: SRR5891809) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.352 424.3988552 Inter-species IS_SRR5891810 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-315 Megahit NCBI (PRJNA393611: SRR5891810) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.487 421.3496666 Inter-species IS_SRR5891811 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-308 Megahit NCBI (PRJNA393611: SRR5891811) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.512 464.4873276 Inter-species IS_SRR5891812 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-299 Megahit NCBI (PRJNA393611: SRR5891812) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.38 406.2408409 Inter-species IS_SRR5891813 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891813) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.453 438.398778 Inter-species IS_SRR5891814 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-363 Megahit NCBI (PRJNA393611: SRR5891814) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.408 399.5772419 Inter-species IS_SRR5891815 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-352 Megahit NCBI (PRJNA393611: SRR5891815) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.532 483.6093721 Inter-species IS_SRR5891816 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-338 Megahit NCBI (PRJNA393611: SRR5891816) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.566 385.1284885 Inter-species IS_SRR5891922 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891922) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.561 510.7182732 Inter-species IS_SRR5891923 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-601 Megahit NCBI (PRJNA393611: SRR5891923) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.312 397.4757729 Inter-species IS_SRR5891924 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891924) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.569 453.825242 Inter-species IS_SRR5891925 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-594 Megahit NCBI (PRJNA393611: SRR5891925) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.42 415.7369976 Inter-species IS_SRR5891926 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891926) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.484 441.4149246 Inter-species IS_SRR5891927 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-549 Megahit NCBI (PRJNA393611: SRR5891927) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.499 446.730793 Inter-species IS_SRR5891928 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891928) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.561 498.3587866 Inter-species IS_SRR5891930 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-689 Megahit NCBI (PRJNA393611: SRR5891930) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.532 474.4362583 Inter-species IS_SRR5891931 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1 Megahit NCBI (PRJNA393611: SRR5891931) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.46 442.110672 Inter-species IS_SRR5891994 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-003 Megahit NCBI (PRJNA393611: SRR5891994) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.556 491.5656586 Inter-species IS_SRR5891995 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-056 Megahit NCBI (PRJNA393611: SRR5891995) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.506 484.4688034 Inter-species IS_SRR5891997 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-17 Megahit NCBI (PRJNA393611: SRR5891997) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.537 76.40417671 Inter-species IS_SRR5892066 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-74 Megahit NCBI (PRJNA393611: SRR5892066) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.548 470.4138975 Inter-species IS_SRR5892071 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-737 Megahit NCBI (PRJNA393611: SRR5892071) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.516 400.916543 Inter-species IS_SRR5892072 Vitis vinifera × Vitis amurensis × Vitis riparia Clone 05-1-700 Megahit NCBI (PRJNA393611: SRR5892072) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.36 422.1685944 Inter-species IS_SRR5891600 Vitis vinifera × Vitis labrusca Takao (4N) Megahit NCBI (PRJNA393611: SRR5891600) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.277 418.9316711 Inter-species IS_SRR5891626 Vitis vinifera × Vitis labrusca Glenora Seedless Megahit NCBI (PRJNA393611: SRR5891626) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.216 353.0692511 Inter-species IS_SRR5891736 Vitis vinifera × Vitis labrusca Rhodo Berry (4N) Megahit NCBI (PRJNA393611: SRR5891736) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.506 403.4892893 Inter-species IS_SRR5891751 Vitis vinifera × Vitis labrusca Naganopapuru Megahit NCBI (PRJNA393611: SRR5891751) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.495 393.5928659 Inter-species IS_SRR5891779 Vitis vinifera × Vitis labrusca Houman Megahit NCBI (PRJNA393611: SRR5891779) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.565 479.5435734 Inter-species IS_SRR5891781 Vitis vinifera × Vitis labrusca Bronx Seedless Megahit NCBI (PRJNA393611: SRR5891781) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.418 430.7829266 Inter-species IS_SRR5891790 Vitis vinifera × Vitis labrusca Buffalo Megahit NCBI (PRJNA393611: SRR5891790) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.554 421.6929216 Inter-species IS_SRR5891849 Vitis vinifera × Vitis labrusca Jasmine (4N) Megahit NCBI (PRJNA393611: SRR5891849) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.525 439.0939159 Inter-species IS_SRR5891852 Vitis vinifera × Vitis labrusca Fujiminori Megahit NCBI (PRJNA393611: SRR5891852) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.645 645.0884008 Inter-species IS_SRR5891857 Vitis vinifera × Vitis labrusca Kunitachi Himrod 1 Megahit NCBI (PRJNA393611: SRR5891857) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.401 414.7700071 Inter-species IS_SRR5891858 Vitis vinifera × Vitis labrusca Kyoho (4N) Megahit NCBI (PRJNA393611: SRR5891858) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.372 381.9768267 Inter-species IS_SRR5891894 Vitis vinifera × Vitis labrusca Izu Nishiki (4N) Megahit NCBI (PRJNA393611: SRR5891894) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.569 425.4100552 Inter-species IS_SRR5891901 Vitis vinifera × Vitis labrusca Ikawa1025 Megahit NCBI (PRJNA393611: SRR5891901) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.607 493.428462 Inter-species IS_SRR5891904 Vitis vinifera × Vitis labrusca Hongze Megahit NCBI (PRJNA393611: SRR5891904) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.557 420.786047 Inter-species IS_SRR5891960 Vitis vinifera × Vitis labrusca Vidal Megahit NCBI (PRJNA393611: SRR5891960) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.492 404.2317705 Inter-species IS_SRR5892008 Vitis vinifera × Vitis labrusca Red Ikawa Megahit NCBI (PRJNA393611: SRR5892008) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.553 430.0787954 Inter-species IS_SRR5892037 Vitis vinifera × Vitis labrusca Jingya Megahit NCBI (PRJNA393611: SRR5892037) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.253 353.0674944 Inter-species IS_SRR5891627 Vitis vinifera × Vitis labrusca Catawba (4N) Megahit NCBI (PRJNA393611: SRR5891627) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.36 357.2244644 Inter-species IS_SRR5891752 Vitis vinifera × Vitis labrusca Super Hamburg Megahit NCBI (PRJNA393611: SRR5891752) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.612 437.0942688 Inter-species IS_SRR5891789 Vitis vinifera × Vitis labrusca Canadice Megahit NCBI (PRJNA393611: SRR5891789) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.533 412.4174109 Inter-species IS_SRR5891851 Vitis vinifera × Vitis labrusca Honey Juice Megahit NCBI (PRJNA393611: SRR5891851) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.488 400.8267574 Inter-species IS_SRR5891861 Vitis vinifera × Vitis labrusca Gros Colman Megahit NCBI (PRJNA393611: SRR5891861) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.651 510.3117161 Inter-species IS_SRR5891867 Vitis vinifera × Vitis labrusca Piaoleisi Megahit NCBI (PRJNA393611: SRR5891867) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.55 405.2882023 Inter-species IS_SRR5891957 Vitis vinifera × Vitis labrusca NA Megahit NCBI (PRJNA393611: SRR5891957) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.449 440.809763 Inter-species IS_SRR5892010 Vitis vinifera × Vitis labrusca Roudingxiang Megahit NCBI (PRJNA393611: SRR5892010) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.528 447.874836 Inter-species IS_SRR5892039 Vitis vinifera × Vitis labrusca Tianyuanqi Megahit NCBI (PRJNA393611: SRR5892039) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.598 472.016202 Inter-species IS_SRR5892043 Vitis vinifera × Vitis labrusca Mars Seedless Megahit NCBI (PRJNA393611: SRR5892043) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.575 484.60744 Inter-species IS_SRR5892048 Vitis vinifera × Vitis labrusca Venus Seedless Megahit NCBI (PRJNA393611: SRR5892048) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.264 328.3659353 Inter-species IS_SRR5892049 Vitis vinifera × Vitis labrusca Swenson Red Megahit NCBI (PRJNA393611: SRR5892049) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.569 460.0925112 Inter-species IS_SRR5892051 Vitis vinifera × Vitis labrusca concord Megahit NCBI (PRJNA393611: SRR5892051) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.488 438.3337927 Inter-species IS_SRR11078313 Vitis vinifera × Vitis labrusca (or unknown) Catawba Megahit NCBI (PRJNA606045: SRR11078313) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.571 611.7624187 Inter-species IS_SRR5891902 Vitis vinifera × Vitis rupestris Hybride France Megahit NCBI (PRJNA393611: SRR5891902) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.462 297.3656311 North American species NA_SRR5891911 Vitis acerifolia Brush Grape\, Mapleleaf Grape Megahit NCBI (PRJNA393611: SRR5891911) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.54 426.1661472 North American species NA_SRR5891912 Vitis acerifolia Brush Grape\, Mapleleaf Grape Megahit NCBI (PRJNA393611: SRR5891912) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.663 426.4879103 North American species NA_SRR5892052 Vitis acerifolia Brush Grape\, Mapleleaf Grape Megahit NCBI (PRJNA393611: SRR5892052) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.442 382.6390619 North American species NA_SRR5892053 Vitis acerifolia Brush Grape\, Mapleleaf Grape Megahit NCBI (PRJNA393611: SRR5892053) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.543 431.9699526 North American species NA_SRR5891988 Vitis acerifolia × Vitis riparia Sori Megahit NCBI (PRJNA393611: SRR5891988) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.477 370.7258644 North American species NA_UCD_b40.14v1 Vitis arizonica Arizonica b40-14 grapegenomics-Vari_b40-14_v1.pseudomolecules grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.897 446.3779593 North American species NA_SRR5891909 Vitis aestivalis Summer Grape Megahit NCBI (PRJNA393611: SRR5891909) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.088 246.0960932 North American species NA_SRR5891910 Vitis aestivalis Summer Grape Megahit NCBI (PRJNA393611: SRR5891910) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.06 293.7467937 North American species NA_SRR5891915 Vitis aestivalis Summer Grape Megahit NCBI (PRJNA393611: SRR5891915) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.694 485.1201439 North American species NA_SRR5891916 Vitis aestivalis Summer Grape Megahit NCBI (PRJNA393611: SRR5891916) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.658 507.4058847 North American species NA_SRR769839 Vitis aestivalis NA Megahit NCBI (PRJNA192798: SRR769839) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.12 171.0582886 North American species NA_SRR8835142 Vitis aestivalis Vitis aestivalis sauvage Megahit NCBI (PRJNA450929: SRR8835142) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.676 411.9133635 North American species NA_SRR8835143 Vitis aestivalis NA Megahit NCBI (PRJNA450929: SRR8835143) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.46 288.2288914 North American species NA_SRR8835175 Vitis aestivalis Aestivalis 1 Megahit NCBI (PRJNA450929: SRR8835175) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.618 390.9354935 North American species NA_SRR8835177 Vitis aestivalis Aestivalis 3 Megahit NCBI (PRJNA450929: SRR8835177) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.635 386.1538916 North American species NA_SRR8835178 Vitis aestivalis Aestivalis 2 Megahit NCBI (PRJNA450929: SRR8835178) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.638 394.4360228 North American species NA_SRR5891913 Vitis aestivalis var. bicolor Blue Grape\, Silverleaf Grape Megahit NCBI (PRJNA393611: SRR5891913) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.615 429.8748112 North American species NA_SRR8835139 Vitis aestivalis var. linsecomii Gross Megahit NCBI (PRJNA450929: SRR8835139) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.558 312.5652561 Vitis rotundifolia RO_UCD_Trayshedv2 Vitis rotundifolia Trayshed grapegenomics-VITMroTrayshed_v2.0 grapegenomics.com The assembled contigs was directly cited. NA Cochetel N, Minio A, Massonnet M, et al. Diploid chromosome-scale assembly of the Muscadinia rotundifolia genome supports chromosome fusion and disease resistance gene expansion during Vitis and Muscadinia divergence[J]. G3, 2021, 11(4): jkab033. 0.988 793.0821857 North American species NA_SRR5891914 Vitis arizonica Canyon Grape Megahit NCBI (PRJNA393611: SRR5891914) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.662 427.6855822 sylvestris SY_UCD_3351.27 Vitis vinifera subsp. sylvestris DVIT3351.27 grapegenomics-VITVvi_sDVIT3351.27_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.978 935.921608 North American species NA_SRR5891903 Vitis berlandieri Berlandieri Resseguier 2 Megahit NCBI (PRJNA393611: SRR5891903) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.381 378.5946417 North American species NA_SRR5891617 Vitis berlandieri × Vitis riparia Kober 5BB Megahit NCBI (PRJNA393611: SRR5891617) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.584 538.9626522 North American species NA_SRR5891618 Vitis berlandieri × Vitis riparia Clone 5BB Megahit NCBI (PRJNA393611: SRR5891618) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.42 390.229332 North American species NA_SRR5891780 Vitis californica California Wild Grape Megahit NCBI (PRJNA393611: SRR5891780) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.527 449.0294285 North American species NA_SRR5891806 Vitis champinii NA Megahit NCBI (PRJNA393611: SRR5891806) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.279 327.4998426 sylvestris SY_UCD_3603.16 Vitis vinifera subsp. sylvestris DVIT3603.16 grapegenomics-VITVvi_sDVIT3603.16_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.987 936.8065014 North American species NA_SRR5891799 Vitis cinerea Ashy Grape\, Grayback Grape Megahit NCBI (PRJNA393611: SRR5891799) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.335 424.1330118 North American species NA_SRR5891805 Vitis cinerea Ashy Grape\, Grayback Grape Megahit NCBI (PRJNA393611: SRR5891805) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.437 416.0017052 North American species NA_SRR5891920 Vitis cinerea Ashy Grape\, Grayback Grape Megahit NCBI (PRJNA393611: SRR5891920) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.618 467.631176 North American species NA_SRR769840 Vitis cinerea NA Megahit NCBI (PRJNA192798: SRR769840) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.093 134.9673014 North American species NA_SRR8835145 Vitis cinerea Resseguier 1 Megahit NCBI (PRJNA450929: SRR8835145) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.622 367.2557745 North American species NA_SRR8835153 Vitis cinerea Cinerea 3 Megahit NCBI (PRJNA450929: SRR8835153) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.659 376.3232355 North American species NA_SRR8835154 Vitis cinerea Cinerea 2 Megahit NCBI (PRJNA450929: SRR8835154) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.67 383.1534166 North American species NA_SRR8835155 Vitis cinerea Cinerea 1 Megahit NCBI (PRJNA450929: SRR8835155) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.656 372.9634438 North American species NA_SRR8835167 Vitis cinerea Planchon Megahit NCBI (PRJNA450929: SRR8835167) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.643 401.3129215 North American species NA_SRR8835176 Vitis cinerea Cinerea clone 10594 Megahit NCBI (PRJNA450929: SRR8835176) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.647 372.6680431 North American species NA_SRR5891802 Vitis cinerea var. helleri Mountain Grape\, Sweet Grape Megahit NCBI (PRJNA393611: SRR5891802) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.482 492.823987 North American species NA_SRR5891800 Vitis doaniana NA Megahit NCBI (PRJNA393611: SRR5891800) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.579 420.7134638 North American species NA_SRR5891801 Vitis doaniana NA Megahit NCBI (PRJNA393611: SRR5891801) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.528 476.4495106 North American species NA_SRR2015347 Vitis girdiana NA Megahit "NCBI (PRJNA283439: SRR2015347) " Illumina HiSeq 2000 PAIRED Yang Y, Mao L, Jittayasothorn Y, et al. Messenger RNA exchange between scions and rootstocks in grafted grapevines[J]. BMC plant biology, 2015, 15(1): 1-14. 0.632 321.8570442 North American species NA_SRR5891919 Vitis girdiana Desert Wild Grape Megahit NCBI (PRJNA393611: SRR5891919) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.687 456.5818415 North American species NA_SRR11078309 Vitis labrusca PI 588164 'Worden' Megahit NCBI (PRJNA606045: SRR11078309) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.131 315.4382668 North American species NA_SRR11078310 Vitis labrusca PI 597203 'Glenfeld' Megahit NCBI (PRJNA606045: SRR11078310) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.437 394.3443127 North American species NA_SRR11078311 Vitis labrusca PI 597172 'Wheeler' Megahit NCBI (PRJNA606045: SRR11078311) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.505 431.9462109 North American species NA_SRR11078312 Vitis labrusca PI 483163 'REM NE36' Megahit NCBI (PRJNA606045: SRR11078312) Illumina HiSeq 2500 PAIRED Yang Y, Cuenca J, Wang N, et al. A key ‘foxy’aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’[J]. Horticulture research, 2020, 7(1): 1-12. 0.338 359.016201 North American species NA_SRR8835146 Vitis labrusca Labrusca Megahit NCBI (PRJNA450929: SRR8835146) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.654 449.1331673 North American species NA_SRR8835149 Vitis labrusca Fredonia Megahit NCBI (PRJNA450929: SRR8835149) Illumina HiSeq 2000 PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.626 390.7238712 North American species NA_SRR5891727 Vitis labrusca × Vitis riparia Beta Megahit NCBI (PRJNA393611: SRR5891727) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.587 595.6930809 North American species NA_SRR5891646 Vitis labrusca × Vitis riparia (Vitis novae-angliae) New England Grape Megahit NCBI (PRJNA393611: SRR5891646) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.599 486.7194977 North American species NA_SRR5891645 Vitis monticola Mountain Grape\, Sweet Mountain Grape Megahit NCBI (PRJNA393611: SRR5891645) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.489 434.2245436 North American species NA_SRR5891777 Vitis monticola × Vitis riparia Castel 188-08 Megahit NCBI (PRJNA393611: SRR5891777) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.437 383.8698349 North American species NA_SRR5892064 Vitis monticola × Vitis riparia MRH20 Megahit NCBI (PRJNA393611: SRR5892064) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.52 386.3440914 North American species NA_SRR769834 Vitis monticola × Vitis riparia MRH20 Megahit NCBI (PRJNA192798: SRR769834) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.002 6.207169533 North American species NA_SRR769835 Vitis monticola × Vitis riparia MEH3 Megahit NCBI (PRJNA192798: SRR769835) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.001 6.306173325 North American species NA_SRR2015348 Vitis palmata NA Megahit NCBI (PRJNA283439: SRR2015348) Illumina HiSeq 2000 PAIRED Yang Y, Mao L, Jittayasothorn Y, et al. Messenger RNA exchange between scions and rootstocks in grafted grapevines[J]. BMC plant biology, 2015, 15(1): 1-14. 0.504 300.2153206 North American species NA_SRR5891647 Vitis palmata Katzenrebe Megahit NCBI (PRJNA393611: SRR5891647) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.512 528.5756741 North American species NA_SRR5891648 Vitis riparia Riverbank Grape Megahit NCBI (PRJNA393611: SRR5891648) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.441 364.0436897 North American species NA_SRR5891649 Vitis riparia Riverbank Grape Megahit NCBI (PRJNA393611: SRR5891649) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.459 359.8515816 North American species NA_SRR769843 Vitis riparia NA Megahit NCBI (PRJNA192798: SRR769843) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.06 124.4733181 sylvestris SY_UCD_sO34.16v1.1 Vitis vinifera subsp. sylvestris O34-16 grapegenomics-VITVvi_sO34-16_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.986 887.2126064 Eurasian species VV_UCD_CoriSeededv1.1 Vitis vinifera Corinth (Seeded) grapegenomics-VITVvi_vBlaCoriSeeded_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.985 960.824749 Eurasian species VV_UCD_CoriSeedlessv1.1 Vitis vinifera Corinth (Seedless) grapegenomics-VITVvi_vBlaCoriSeedless_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.985 916.7576628 Eurasian species VV_UCD_CabFran04v1 Vitis vinifera Cabernet Franc grapegenomics-VITVvi_vCabFran04_v1 grapegenomics.com The assembled contigs was directly cited. NA Vondras A M, Lerno L, Massonnet M, et al. Rootstock influences the effect of grapevine leafroll‐associated viruses on berry development and metabolism via abscisic acid signalling[J]. Molecular Plant Pathology, 2021. 0.976 810.9044666 North American species NA_SRR2016902 Vitis riparia × Vitis rupestris 3309C Megahit NCBI (PRJNA283439: SRR2016902) Illumina HiSeq 2000 PAIRED Yang Y, Mao L, Jittayasothorn Y, et al. Messenger RNA exchange between scions and rootstocks in grafted grapevines[J]. BMC plant biology, 2015, 15(1): 1-14. 0.572 326.1324539 North American species NA_SRR5891889 Vitis riparia × Vitis rupestris Millardet Et Grasset 101- 14 Megahit NCBI (PRJNA393611: SRR5891889) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.377 354.6522074 Eurasian species VV_UCD_CabSauv08v1.1 Vitis vinifera Cabernet Sauvignon grapegenomics-VITVvi_vCabSauv08_v1.1.pseudomolecules grapegenomics.com The assembled contigs was directly cited. NA Chin C S, Peluso P, Sedlazeck F J, et al. Phased diploid genome assembly with single-molecule real-time sequencing[J]. Nature methods, 2016, 13(12): 1050-1054. 0.985 911.2698317 North American species NA_SRR5891650 Vitis rupestris Rock Grape\, Sand Grape Megahit NCBI (PRJNA393611: SRR5891650) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.194 338.0107059 North American species NA_SRR5891651 Vitis rupestris Rock Grape\, Sand Grape Megahit NCBI (PRJNA393611: SRR5891651) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.514 390.9617491 North American species NA_SRR5891652 Vitis rupestris Rock Grape\, Sand Grape Megahit NCBI (PRJNA393611: SRR5891652) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.572 446.2834444 North American species NA_SRR5891653 Vitis rupestris Rock Grape\, Sand Grape Megahit NCBI (PRJNA393611: SRR5891653) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.346 398.6856489 North American species NA_SRR769836 Vitis rupestris NA Megahit NCBI (PRJNA192798: SRR769836) Illumina Genome Analyzer II PAIRED Xin H, Zhang J, Zhu W, et al. The effects of artificial selection on sugar metabolism and transporter genes in grape[J]. Tree genetics & genomes, 2013, 9(5): 1343-1349. 0.002 5.208733559 North American species NA_SRR8699314 Vitis rupestris NA Megahit NCBI (PRJNA281110: SRR8699314) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.681 516.657217 North American species NA_SRR8699316 Vitis rupestris " Pillans" Megahit NCBI (PRJNA281110: SRR8699316) Illumina HiSeq 2500 PAIRED Hyma K E, Barba P, Wang M, et al. Heterozygous mapping strategy (HetMappS) for high resolution genotyping-by-sequencing markers: a case study in grapevine[J]. PloS one, 2015, 10(8): e0134880. 0.686 512.534153 Eurasian species VV_UCD_MerlFPS15v1.1 Vitis vinifera Merlot grapegenomics-VITVvi_vMerlFPS15_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Massonnet M, Cochetel N, Minio A, et al. The genetic basis of sex determination in grapes[J]. Nature communications, 2020, 11(1): 1-12. 0.984 810.5783567 North American species NA_SRR5891654 Vitis slavinii NA Megahit NCBI (PRJNA393611: SRR5891654) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.48 448.1357727 North American species NA_SRR5891664 Vitis tiliifolia Caribbean Grape Megahit NCBI (PRJNA393611: SRR5891664) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.701 426.6868544 North American species NA_SRR5891663 Vitis treleasei Gulch Grape Megahit NCBI (PRJNA393611: SRR5891663) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.683 489.3271837 North American species NA_SRR5891662 Vitis vulpina Frost Grape\, Winter Grape Megahit NCBI (PRJNA393611: SRR5891662) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.359 377.4551973 North American species NA_SRR5891665 Vitis vulpina Frost Grape\, Winter Grape Megahit NCBI (PRJNA393611: SRR5891665) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.643 491.7183104 Eurasian species VV_UCD_RiesFPS24v1 Vitis vinifera Riesling grapegenomics-VITVvi_vRiesFPS24_v1 grapegenomics.com The assembled contigs was directly cited. NA Zou C, Massonnet M, Minio A, et al. Multiple independent recombinations led to hermaphroditism in grapevine[J]. Proceedings of the National Academy of Sciences, 2021, 118(15). 0.986 1015.417212 sylvestris SY_SRR12265749 Vitis vinifera subsp. sylvestris Banias-3 Megahit NCBI (PRJNA647155: SRR12265749) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.596 375.2337122 sylvestris SY_SRR12265757 Vitis vinifera subsp. sylvestris Samech-1 Megahit NCBI (PRJNA647155: SRR12265757) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.03 47.35556221 sylvestris SY_SRR12265763 Vitis vinifera subsp. sylvestris Pumela Megahit NCBI (PRJNA647155: SRR12265763) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.13 141.4136915 sylvestris SY_SRR12265766 Vitis vinifera subsp. sylvestris Michnaf Megahit NCBI (PRJNA647155: SRR12265766) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.299 243.7221174 sylvestris SY_SRR12265774 Vitis vinifera subsp. sylvestris Male-1 Megahit NCBI (PRJNA647155: SRR12265774) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.489 292.0944386 sylvestris SY_SRR12265775 Vitis vinifera subsp. sylvestris Majrase Megahit NCBI (PRJNA647155: SRR12265775) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.467 296.0238857 sylvestris SY_SRR12265776 Vitis vinifera subsp. sylvestris Magof Megahit NCBI (PRJNA647155: SRR12265776) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.398 263.2477121 sylvestris SY_SRR12265779 Vitis vinifera subsp. sylvestris Kineret-m Megahit NCBI (PRJNA647155: SRR12265779) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.565 310.6532764 sylvestris SY_SRR12265781 Vitis vinifera subsp. sylvestris Kane Megahit NCBI (PRJNA647155: SRR12265781) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.266 237.2574339 sylvestris SY_SRR12265783 Vitis vinifera subsp. sylvestris Kalik-1 Megahit NCBI (PRJNA647155: SRR12265783) Illumina HiSeq 2500 PAIRED Sivan A, Rahimi O, Lavi B, et al. Genomic evidence supports an independent history of Levantine and Eurasian grapevines[J]. Plants, People, Planet, 2021. 0.459 284.9097462 sylvestris SY_SRR3497168 Vitis vinifera subsp. sylvestris Pomela Megahit NCBI (PRJNA321237: SRR3497168) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.13 141.2704639 sylvestris SY_SRR3509067 Vitis vinifera subsp. sylvestris Kana Megahit NCBI (PRJNA321237: SRR3509067) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.266 237.0660028 sylvestris SY_SRR3509717 Vitis vinifera subsp. sylvestris Michnaf Megahit NCBI (PRJNA321237: SRR3509717) Illumina HiSeq 2500 PAIRED Drori E, Rahimi O, Marrano A, et al. Collection and characterization of grapevine genetic resources (Vitis vinifera) in the Holy Land, towards the renewal of ancient winemaking practices[J]. Scientific reports, 2017, 7(1): 1-12. 0.299 243.5467052 sylvestris SY_SRR5627783 Vitis vinifera subsp. sylvestris Turkmenistan1 Megahit NCBI (PRJNA388292: SRR5627783) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.595 493.2134352 sylvestris SY_SRR5627784 Vitis vinifera subsp. sylvestris Armenia Megahit NCBI (PRJNA388292: SRR5627784) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.22 298.7320814 sylvestris SY_SRR5627785 Vitis vinifera subsp. sylvestris Pakistan1 Megahit NCBI (PRJNA388292: SRR5627785) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.702 456.2416668 sylvestris SY_SRR5627786 Vitis vinifera subsp. sylvestris Turkmenistan2 Megahit NCBI (PRJNA388292: SRR5627786) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.673 433.5398693 sylvestris SY_SRR5627787 Vitis vinifera subsp. sylvestris Azerbaijan1 Megahit NCBI (PRJNA388292: SRR5627787) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.642 418.4633837 sylvestris SY_SRR5627789 Vitis vinifera subsp. sylvestris Georgia Megahit NCBI (PRJNA388292: SRR5627789) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.699 421.6088066 sylvestris SY_SRR5627790 Vitis vinifera subsp. sylvestris Azerbaijan2 Megahit NCBI (PRJNA388292: SRR5627790) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.643 412.0808725 sylvestris SY_SRR5627791 Vitis vinifera subsp. sylvestris Pakistan3 Megahit NCBI (PRJNA388292: SRR5627791) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.71 464.2112446 sylvestris SY_SRR5627792 Vitis vinifera subsp. sylvestris Pakistan2 Megahit NCBI (PRJNA388292: SRR5627792) Illumina HiSeq 2500 PAIRED Zhou Y, Massonnet M, Sanjak J S, et al. Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication[J]. Proceedings of the National Academy of Sciences, 2017, 114(44): 11715-11720. 0.671 492.8676233 sylvestris SY_SRR5891605 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891605) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.459 375.2225685 sylvestris SY_SRR5891606 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891606) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.53 371.2634583 sylvestris SY_SRR5891607 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891607) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.571 401.8675489 sylvestris SY_SRR5891608 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891608) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.663 423.072772 sylvestris SY_SRR5891609 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891609) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.456 378.6900053 sylvestris SY_SRR5891610 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891610) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.675 424.7801676 sylvestris SY_SRR5891611 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891611) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.738 454.2426834 sylvestris SY_SRR5891612 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891612) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.638 396.7746973 sylvestris SY_SRR5891613 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891613) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.425 374.5828791 sylvestris SY_SRR5891614 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891614) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.654 394.706789 sylvestris SY_SRR5891676 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891676) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.555 393.7836113 sylvestris SY_SRR5891677 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891677) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.581 407.5865974 sylvestris SY_SRR5891678 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891678) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.624 392.7361374 sylvestris SY_SRR5891679 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891679) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.691 436.1376524 sylvestris SY_SRR5891702 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891702) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.598 394.3864613 sylvestris SY_SRR5891703 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891703) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.698 440.4896231 sylvestris SY_SRR5891704 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891704) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.656 402.9974117 sylvestris SY_SRR5891705 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891705) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.679 411.2974558 sylvestris SY_SRR5891706 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891706) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.714 429.0516329 sylvestris SY_SRR5891707 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891707) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.622 395.5635233 sylvestris SY_SRR5891708 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891708) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.561 383.5092192 sylvestris SY_SRR5891709 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891709) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.706 417.1017733 sylvestris SY_SRR5891710 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891710) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.574 373.5911131 Eurasian species VV_UCD_Zin03v1.1 Vitis vinifera Zinfandel grapegenomics-VITVvi_vZin03_v1.1 grapegenomics.com The assembled contigs was directly cited. NA Vondras A M, Minio A, Blanco-Ulate B, et al. The genomic diversification of grapevine clones[J]. BMC genomics, 2019, 20(1): 1-19. 0.985 855.8081112 sylvestris SY_SRR5891711 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891711) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.619 401.5125132 sylvestris SY_SRR5891712 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891712) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.497 382.0027332 sylvestris SY_SRR5891713 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891713) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.633 388.6966743 sylvestris SY_SRR5891714 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891714) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.642 400.4614563 sylvestris SY_SRR5891715 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891715) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.494 387.9178772 sylvestris SY_SRR5891716 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891716) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.513 385.3551369 sylvestris SY_SRR5891717 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891717) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.501 376.5288067 sylvestris SY_SRR5891718 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891718) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.604 389.2870264 sylvestris SY_SRR5891719 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891719) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.681 410.4951563 sylvestris SY_SRR5891720 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891720) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.611 391.9792404 sylvestris SY_SRR5891721 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891721) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.726 433.5976038 sylvestris SY_SRR5891759 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891759) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.697 443.0400953 sylvestris SY_SRR5891760 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891760) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.707 427.4817133 sylvestris SY_SRR5891761 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891761) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.669 402.9817457 sylvestris SY_SRR5891762 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891762) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.626 398.1100645 sylvestris SY_SRR5891763 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891763) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.68 419.1063271 sylvestris SY_SRR5891764 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891764) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.697 421.7457857 sylvestris SY_SRR5891765 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891765) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.695 395.9419794 sylvestris SY_SRR5891766 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891766) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.726 429.5397406 sylvestris SY_SRR5891767 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891767) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.682 459.2912035 sylvestris SY_SRR5891768 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891768) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.705 416.3309517 sylvestris SY_SRR5891874 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891874) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.701 406.1411095 sylvestris SY_SRR5891875 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891875) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.694 413.6348057 sylvestris SY_SRR5891876 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891876) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.723 449.6850157 sylvestris SY_SRR5891877 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891877) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.709 427.4581881 sylvestris SY_SRR5891878 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891878) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.714 440.2959948 sylvestris SY_SRR5891879 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891879) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.702 436.0757399 sylvestris SY_SRR5891880 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891880) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.725 434.8652353 sylvestris SY_SRR5891881 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891881) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.701 414.7603245 sylvestris SY_SRR5891882 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891882) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.678 411.0008526 sylvestris SY_SRR5891883 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891883) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.657 395.5836515 sylvestris SY_SRR5891934 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891934) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.673 406.2670412 sylvestris SY_SRR5891935 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891935) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.73 428.0093174 sylvestris SY_SRR5891936 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891936) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.67 397.2140417 sylvestris SY_SRR5891937 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891937) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.565 379.0070601 sylvestris SY_SRR5891938 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891938) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.712 426.8100195 sylvestris SY_SRR5891939 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891939) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.56 389.8765574 sylvestris SY_SRR5891940 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891940) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.724 445.2482843 sylvestris SY_SRR5891941 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891941) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.662 404.3553505 sylvestris SY_SRR5891942 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891942) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.724 425.0048027 sylvestris SY_SRR5891943 Vitis vinifera subsp. sylvestris NA Megahit NCBI (PRJNA393611: SRR5891943) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.535 376.2914352 sylvestris SY_SRR8835138 Vitis vinifera subsp. sylvestris Dirmstein male Megahit NCBI (PRJNA450929: SRR8835138) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.382 277.1651573 sylvestris SY_SRR8835141 Vitis vinifera subsp. sylvestris Teulere pied sauvage Megahit NCBI (PRJNA450929: SRR8835141) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.624 324.7139349 sylvestris SY_SRR8835162 Vitis vinifera subsp. sylvestris Lambrusque PSL2 Megahit NCBI (PRJNA450929: SRR8835162) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.536 317.2190781 sylvestris SY_SRR8835164 Vitis vinifera subsp. sylvestris Lambrusque Campmarcel Megahit NCBI (PRJNA450929: SRR8835164) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.214 231.0913363 sylvestris SY_SRR8835165 Vitis vinifera subsp. sylvestris Lambrusque E Megahit NCBI (PRJNA450929: SRR8835165) Illumina Genome Analyzer IIx PAIRED Laucou V, Launay A, Bacilieri R, et al. Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs[J]. PloS one, 2018, 13(2): e0192540. 0.58 318.6889811 sylvestris SY_SRR9591081 Vitis vinifera subsp. sylvestris VvsMale1 Megahit NCBI (PRJNA549602: SRR9591081) Illumina HiSeq 4000 PAIRED Ramos M J N, Coito J L, Faísca-Silva D, et al. Portuguese wild grapevine genome re-sequencing (Vitis vinifera sylvestris)[J]. Scientific reports, 2020, 10(1): 1-15. 0.69 493.8820658 sylvestris SY_SRR9591082 Vitis vinifera subsp. sylvestris VvsFemale1 Megahit NCBI (PRJNA549602: SRR9591082) Illumina HiSeq 4000 PAIRED Ramos M J N, Coito J L, Faísca-Silva D, et al. Portuguese wild grapevine genome re-sequencing (Vitis vinifera sylvestris)[J]. Scientific reports, 2020, 10(1): 1-15. 0.703 477.0346775 Eurasian species VV_UCD_CarFPS02 Vitis vinifera Carmenere grapegenomics-VvCarFPS02VCR702_v1 grapegenomics.com The assembled contigs was directly cited. NA Minio A, Massonnet M, Figueroa-Balderas R, et al. Diploid genome assembly of the wine grape Carménère[J]. G3: Genes, Genomes, Genetics, 2019, 9(5): 1331-1337. 0.988 994.468256 North American species NA_Manitoba37 Vitis riparia Manitoba37 Manitoba37 https://openprairie.sdstate.edu/vitis_riparia_VR37_PI588259/ The assembled contigs was directly cited. NA Patel S, Robben M, Fennell A, et al. Draft genome of the Native American cold hardy grapevine Vitis riparia Michx.‘Manitoba 37’[J]. Horticulture research, 2020, 7(1): 1-13. 0.824 457.9461346 Eurasian species VV_SultaninaPLATGC Vitis vinifera Sultanina Sultanina-PLAT_GC https://openprairie.sdstate.edu/vitis_vinifera_sultanina/1/ The assembled contigs was directly cited. NA Patel S, Lu Z, Jin X, et al. Comparison of three assembly strategies for a heterozygous seedless grapevine genome assembly[J]. BMC genomics, 2018, 19(1): 1-12. 0.829 517.3494692 sylvestris SY_GDB_2426.77 Vitis vinifera subsp. sylvestris DVIT2426.77 VITISGDB-DVIT_2426.77_SV-1_v1.0 VitisGDB The assembled contigs was directly cited. NA NA 0.892 450.3174391 Undefined UN_SRR5891728 Vitis (Undefined) HN 12 Megahit NCBI (PRJNA393611: SRR5891728) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.204 322.1765099 Undefined UN_SRR5891732 Vitis (Undefined) NA Megahit NCBI (PRJNA393611: SRR5891732) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.61 685.3573732 Undefined UN_SRR5891837 Vitis (Undefined) NA Megahit NCBI (PRJNA393611: SRR5891837) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.618 545.4918022 Undefined UN_SRR5891864 Vitis (Undefined) Triumph d Alsace Megahit NCBI (PRJNA393611: SRR5891864) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.519 454.0417738 Undefined UN_SRR5891891 Vitis (Undefined) Landot 234 Megahit NCBI (PRJNA393611: SRR5891891) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.219 342.6134377 Undefined UN_SRR5891974 Vitis (Undefined) Bailey Alicante Megahit NCBI (PRJNA393611: SRR5891974) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.237 295.4042454 Undefined UN_SRR5891977 Vitis (Undefined) Bailey Alicante A Megahit NCBI (PRJNA393611: SRR5891977) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.542 447.0689659 Undefined UN_SRR5891984 Vitis (Undefined) Agria Megahit NCBI (PRJNA393611: SRR5891984) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.426 385.3119602 Undefined UN_SRR5892044 Vitis (Undefined) Rubaiyat Megahit NCBI (PRJNA393611: SRR5892044) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.349 382.9074392 East Asian species EA_GDB_davidiiHNC Vitis davidii NA VITISGDB-V.davidii_HNC VitisGDB The assembled contigs was directly cited. NA NA 0.822 479.0489254 North American species NA_GDB_M1045 Vitis rupestris Rupestris M1045 VITISGDB-V.rupestris_M1045 VitisGDB The assembled contigs was directly cited. NA NA 0.818 525.8510323 Vitis rotundifolia RO_SRR5892042 Vitis rotundifolia Dixie Megahit NCBI (PRJNA393611: SRR5892042) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.521 403.5875645 Vitis rotundifolia RO_SRR5892060 Vitis rotundifolia NA Megahit NCBI (PRJNA393611: SRR5892060) Illumina HiSeq 4000 PAIRED Liang Z, Duan S, Sheng J, et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses[J]. Nature communications, 2019, 10(1): 1-12. 0.619 403.1749277 Vitis rotundifolia RO_SRR6729326 Vitis rotundifolia Fry 5 Megahit NCBI (PRJNA397021: SRR6729326) Illumina Genome Analyzer II PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.466 283.742547 Vitis rotundifolia RO_SRR6729327 Vitis rotundifolia Carlos Megahit NCBI (PRJNA397021: SRR6729327) Illumina Genome Analyzer II PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.669 331.6625538 Vitis rotundifolia RO_SRR6729328 Vitis rotundifolia Mchx Megahit NCBI (PRJNA397021: SRR6729328) Illumina Genome Analyzer II PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.679 322.9173183 Vitis rotundifolia RO_SRR6729329 Vitis rotundifolia Dulcet Megahit NCBI (PRJNA397021: SRR6729329) Illumina Genome Analyzer II PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.663 341.6496048 Vitis rotundifolia RO_SRR6729331 Vitis rotundifolia Regale Megahit NCBI (PRJNA397021: SRR6729330, SRR6729331) Illumina Genome Analyzer II;Illumina HiSeq 2000 PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.726 406.0137167 Vitis rotundifolia RO_SRR6729332 Vitis rotundifolia YugaxCarlos Megahit NCBI (PRJNA397021: SRR6729332) Illumina Genome Analyzer II PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.632 337.0387812 Vitis rotundifolia RO_SRR6729333 Vitis rotundifolia Trayshed-1 Megahit NCBI (PRJNA397021: SRR6729333) Illumina Genome Analyzer II PAIRED Delame M, Prado E, Blanc S, et al. Introgression reshapes recombination distribution in grapevine interspecific hybrids[J]. Theoretical and applied genetics, 2019, 132(4): 1073-1087. 0.552 302.62924 Eurasian species VV_ENTAV115 Vitis vinifera ENTAV 115 NCBI (PRJEA18357) The assembled contigs was directly cited. NA Velasco R, Zharkikh A, Troggio M, et al. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety[J]. PloS one, 2007, 2(12): e1326. 0.803 402.221962